Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC018717.1-201ENST00000457712 1505 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 MIR199B-201ENST00000384849 110 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 MIR1204-201ENST00000408388 67 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AMYP1-201ENST00000440059 1023 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AL138895.2-201ENST00000603019 178 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AF121897.1-201ENST00000411867 3980 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 EMC3-AS1-205ENST00000438698 534 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AL590004.3-202ENST00000445883 451 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 HMGB1P7-201ENST00000450921 612 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 HLA-DPA3-207ENST00000454398 229 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AC026826.1-201ENST00000493002 361 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 OR4D12P-201ENST00000509361 911 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 COX6B1P4-201ENST00000519826 484 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 AC090115.2-201ENST00000548060 883 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42BPAQ5VT25 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 VTRNA3-1P-201ENST00000362552 102 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC010240.2-201ENST00000445363 1205 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AP002453.1-201ENST00000492327 668 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC008507.3-201ENST00000585753 472 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC092266.1-201ENST00000610958 165 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC026951.2-201ENST00000613847 241 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 MAPK10-377ENST00000642006 2752 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AL133243.2-201ENST00000610331 1621 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 AC027279.1-201ENST00000568885 4284 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 MTHFD1P1-201ENST00000413059 2764 ntBASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
CDC42BPAQ5VT25 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 CHEK2P5-201ENST00000423877 246 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 PSMC1P2-201ENST00000423961 1204 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC115283.1-201ENST00000427353 400 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC097463.1-201ENST00000447288 481 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 UGT2A3P7-201ENST00000510485 734 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC060775.1-201ENST00000518241 520 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 AP001437.1-201ENST00000608783 456 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42BPAQ5VT25 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms