Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CD40P25942 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CD40P25942 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.57□□□□□ -1.36
CD40P25942 AC132825.1-201ENST00000463573 2247 ntBASIC6.57□□□□□ -1.36
CD40P25942 DDX50P1-201ENST00000438163 2400 ntBASIC6.57□□□□□ -1.36
CD40P25942 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC6.57□□□□□ -1.36
CD40P25942 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CD40P25942 AL357556.1-201ENST00000421884 1388 ntBASIC6.57□□□□□ -1.36
CD40P25942 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.57□□□□□ -1.36
CD40P25942 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 NLRP9P1-201ENST00000540920 2655 ntBASIC6.56□□□□□ -1.36
CD40P25942 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 AL355578.1-201ENST00000607405 1328 ntBASIC6.56□□□□□ -1.36
CD40P25942 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AC007382.1-201ENST00000624376 2618 ntBASIC6.56□□□□□ -1.36
CD40P25942 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CD40P25942 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 OR11H13P-201ENST00000359695 979 ntBASIC6.56□□□□□ -1.36
CD40P25942 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 AL096711.1-201ENST00000404780 554 ntBASIC6.56□□□□□ -1.36
CD40P25942 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.56□□□□□ -1.36
CD40P25942 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 GRPEL2P2-201ENST00000421856 670 ntBASIC6.56□□□□□ -1.36
CD40P25942 CLIC4P3-201ENST00000422221 752 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.56□□□□□ -1.36
CD40P25942 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 MTCYBP29-201ENST00000436327 1006 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 VN1R25P-201ENST00000443385 738 ntBASIC6.56□□□□□ -1.36
CD40P25942 Z73417.1-201ENST00000447373 778 ntBASIC6.56□□□□□ -1.36
CD40P25942 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.56□□□□□ -1.36
CD40P25942 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 RN7SL516P-201ENST00000496127 297 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 AC147055.3-201ENST00000510547 851 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 AC111000.1-201ENST00000514545 713 ntBASIC6.56□□□□□ -1.36
CD40P25942 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AP002004.1-206ENST00000532441 876 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.56□□□□□ -1.36
CD40P25942 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.56□□□□□ -1.36
CD40P25942 BTG1P1-201ENST00000540396 508 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 AC091515.1-201ENST00000548110 679 ntBASIC6.56□□□□□ -1.36
CD40P25942 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.56□□□□□ -1.36
CD40P25942 RN7SL697P-201ENST00000582484 299 ntBASIC6.56□□□□□ -1.36
CD40P25942 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 MTCO2P22-201ENST00000603246 681 ntBASIC6.56□□□□□ -1.36
CD40P25942 FAM72A-208ENST00000607379 1139 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC084782.3-201ENST00000612282 578 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC006335.3-201ENST00000613408 292 ntBASIC6.56□□□□□ -1.36
CD40P25942 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC022079.2-201ENST00000619739 566 ntBASIC6.56□□□□□ -1.36
CD40P25942 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 AC129908.1-201ENST00000624553 648 ntBASIC6.56□□□□□ -1.36
CD40P25942 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 AC241377.2-202ENST00000636462 997 ntBASIC6.56□□□□□ -1.36
CD40P25942 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 AC093909.5-201ENST00000621839 1799 ntBASIC6.56□□□□□ -1.36
CD40P25942 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 AC087045.3-201ENST00000623046 2468 ntBASIC6.56□□□□□ -1.36
CD40P25942 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms