Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 RNU1-38P-201ENST00000362817 144 ntBASIC6□□□□□ -1.45
SSX3Q99909 RNU1-24P-201ENST00000364285 165 ntBASIC6□□□□□ -1.45
SSX3Q99909 RNU1-122P-201ENST00000365538 156 ntBASIC6□□□□□ -1.45
SSX3Q99909 SSX6-201ENST00000376932 562 ntBASIC6□□□□□ -1.45
SSX3Q99909 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX3Q99909 MIR1204-201ENST00000408388 67 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC020983.1-201ENST00000417063 543 ntBASIC6□□□□□ -1.45
SSX3Q99909 FTOP1-201ENST00000419363 861 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6□□□□□ -1.45
SSX3Q99909 AC105052.2-201ENST00000434317 794 ntBASIC6□□□□□ -1.45
SSX3Q99909 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AC244505.2-201ENST00000435089 759 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6□□□□□ -1.45
SSX3Q99909 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AC018892.2-201ENST00000457656 693 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC008620.1-201ENST00000468453 592 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AC010409.2-201ENST00000505780 478 ntBASIC6□□□□□ -1.45
SSX3Q99909 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6□□□□□ -1.45
SSX3Q99909 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6□□□□□ -1.45
SSX3Q99909 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6□□□□□ -1.45
SSX3Q99909 AC011611.6-201ENST00000547483 255 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6□□□□□ -1.45
SSX3Q99909 UBE2CP4-201ENST00000561405 535 ntBASIC6□□□□□ -1.45
SSX3Q99909 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6□□□□□ -1.45
SSX3Q99909 RN7SL835P-201ENST00000579920 262 ntBASIC6□□□□□ -1.45
SSX3Q99909 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 CR382285.1-202ENST00000604687 547 ntBASIC6□□□□□ -1.45
SSX3Q99909 AL121583.1-201ENST00000612444 682 ntBASIC6□□□□□ -1.45
SSX3Q99909 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 AC007923.2-201ENST00000584218 1591 ntBASIC6□□□□□ -1.45
SSX3Q99909 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSX3Q99909 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AC020978.6-201ENST00000571197 3177 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 SAMMSON-203ENST00000641005 2168 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AC090132.1-201ENST00000524071 1480 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 ARMCX7P-201ENST00000372828 562 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 PPIAP26-201ENST00000377951 522 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AL139806.1-201ENST00000403057 1002 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 RN7SKP225-201ENST00000410405 352 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 RN7SKP30-201ENST00000411373 334 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 AF274573.1-201ENST00000430535 494 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 RPL5P4-201ENST00000434805 886 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 LIN28AP2-201ENST00000445283 458 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 SS18L2P1-201ENST00000445923 213 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 DEFA11P-201ENST00000446470 261 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 NDUFB4P1-201ENST00000462398 381 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC015820.1-201ENST00000473882 321 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC008040.4-201ENST00000494834 768 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC106760.2-201ENST00000504159 619 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC134698.1-201ENST00000511619 643 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms