Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 AC113608.1-201ENST00000398740 305 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX2P48431 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 GTF3AP1-201ENST00000416942 1004 ntBASIC6.19□□□□□ -1.42
SOX2P48431 FTOP1-201ENST00000419363 861 ntBASIC6.19□□□□□ -1.42
SOX2P48431 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SOX2P48431 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AC074367.1-201ENST00000438685 1125 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX2P48431 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 RN7SL797P-201ENST00000486314 297 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
SOX2P48431 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 AP003049.1-201ENST00000529418 457 ntBASIC6.19□□□□□ -1.42
SOX2P48431 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 AC012414.2-201ENST00000559474 187 ntBASIC6.19□□□□□ -1.42
SOX2P48431 MIR5192-201ENST00000579892 92 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AC068802.1-201ENST00000603420 732 ntBASIC6.19□□□□□ -1.42
SOX2P48431 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AC084824.5-201ENST00000612009 413 ntBASIC6.19□□□□□ -1.42
SOX2P48431 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AC079456.1-201ENST00000624010 480 ntBASIC6.19□□□□□ -1.42
SOX2P48431 AC022919.1-201ENST00000624979 626 ntBASIC6.19□□□□□ -1.42
SOX2P48431 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AL513523.1-201ENST00000417868 1309 ntBASIC6.19□□□□□ -1.42
SOX2P48431 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.19□□□□□ -1.42
SOX2P48431 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 AC122713.2-201ENST00000624942 3335 ntBASIC6.19□□□□□ -1.42
SOX2P48431 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 CLCA3P-203ENST00000490028 2781 ntBASIC6.18□□□□□ -1.42
SOX2P48431 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 AP005139.1-201ENST00000580702 1647 ntBASIC6.18□□□□□ -1.42
SOX2P48431 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 MIR181C-201ENST00000384881 110 ntBASIC6.18□□□□□ -1.42
SOX2P48431 RPL9P21-201ENST00000392269 505 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 UBE2V1P15-201ENST00000407776 448 ntBASIC6.18□□□□□ -1.42
SOX2P48431 GAPDHP55-201ENST00000423136 803 ntBASIC6.18□□□□□ -1.42
SOX2P48431 GAPDHP46-201ENST00000424043 994 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 VN1R53P-201ENST00000429536 957 ntBASIC6.18□□□□□ -1.42
SOX2P48431 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX2P48431 CYP2C56P-201ENST00000440076 291 ntBASIC6.18□□□□□ -1.42
SOX2P48431 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 AC002553.1-201ENST00000442828 802 ntBASIC6.18□□□□□ -1.42
SOX2P48431 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.18□□□□□ -1.42
SOX2P48431 VN1R48P-201ENST00000448149 1036 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AL353718.1-201ENST00000451028 517 ntBASIC6.18□□□□□ -1.42
SOX2P48431 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX2P48431 RN7SL549P-201ENST00000478997 282 ntBASIC6.18□□□□□ -1.42
SOX2P48431 CEACAMP3-202ENST00000483806 638 ntBASIC6.18□□□□□ -1.42
SOX2P48431 GGTA1P-204ENST00000488429 1104 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC008040.4-201ENST00000494834 768 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 OR7E163P-201ENST00000505943 894 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC096754.1-201ENST00000508904 818 ntBASIC6.18□□□□□ -1.42
SOX2P48431 OR10J9P-201ENST00000511932 987 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX2P48431 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 AP003499.1-201ENST00000527217 574 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX2P48431 OR4N3P-201ENST00000559395 818 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms