Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC011447.2-201ENST00000592921 283 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 AL355333.1-201ENST00000605632 279 ntBASIC6.43□□□□□ -1.38
RFC3P40938 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 LPAL2-203ENST00000454031 2498 ntBASIC6.43□□□□□ -1.38
RFC3P40938 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 AC018688.1-201ENST00000636528 1754 ntBASIC6.43□□□□□ -1.38
RFC3P40938 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.43□□□□□ -1.38
RFC3P40938 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RFC3P40938 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 AL031123.3-201ENST00000623345 1837 ntBASIC6.43□□□□□ -1.38
RFC3P40938 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
RFC3P40938 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 TRIM53CP-201ENST00000531490 1354 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AP000641.1-201ENST00000531988 1639 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC090771.1-201ENST00000585803 1618 ntBASIC6.43□□□□□ -1.38
RFC3P40938 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RFC3P40938 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 RPL24P7-201ENST00000399435 453 ntBASIC6.42□□□□□ -1.38
RFC3P40938 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.42□□□□□ -1.38
RFC3P40938 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 CHCHD3P1-201ENST00000425516 676 ntBASIC6.42□□□□□ -1.38
RFC3P40938 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 AC066616.1-201ENST00000486795 413 ntBASIC6.42□□□□□ -1.38
RFC3P40938 RN7SL612P-201ENST00000497704 295 ntBASIC6.42□□□□□ -1.38
RFC3P40938 MRPL57P6-201ENST00000506570 309 ntBASIC6.42□□□□□ -1.38
RFC3P40938 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 AC120036.3-201ENST00000517826 292 ntBASIC6.42□□□□□ -1.38
RFC3P40938 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.42□□□□□ -1.38
RFC3P40938 AC027667.1-201ENST00000545814 304 ntBASIC6.42□□□□□ -1.38
RFC3P40938 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.42□□□□□ -1.38
RFC3P40938 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 AC139493.1-201ENST00000604368 397 ntBASIC6.42□□□□□ -1.38
RFC3P40938 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 CDY19P-201ENST00000411668 1613 ntBASIC6.42□□□□□ -1.38
RFC3P40938 CDY18P-201ENST00000438294 1609 ntBASIC6.42□□□□□ -1.38
RFC3P40938 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RFC3P40938 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
RFC3P40938 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.42□□□□□ -1.38
RFC3P40938 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFC3P40938 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 TPTE2P2-201ENST00000403471 1466 ntBASIC6.41□□□□□ -1.38
RFC3P40938 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFC3P40938 KARSP2-201ENST00000415696 1639 ntBASIC6.41□□□□□ -1.38
RFC3P40938 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFC3P40938 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFC3P40938 LDHAP5-201ENST00000394996 622 ntBASIC6.41□□□□□ -1.38
RFC3P40938 ARSFP1-201ENST00000398758 477 ntBASIC6.41□□□□□ -1.38
RFC3P40938 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC006509.1-201ENST00000420788 634 ntBASIC6.41□□□□□ -1.38
RFC3P40938 AL589794.1-201ENST00000424971 390 ntBASIC6.41□□□□□ -1.38
RFC3P40938 RPL5P4-201ENST00000434805 886 ntBASIC6.41□□□□□ -1.38
RFC3P40938 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AL845321.1-201ENST00000444603 348 ntBASIC6.41□□□□□ -1.38
RFC3P40938 GOT2P2-201ENST00000450663 1251 ntBASIC6.41□□□□□ -1.38
RFC3P40938 AC021074.2-201ENST00000468434 172 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms