Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.31□□□□□ -1.4
SHC1P29353 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.31□□□□□ -1.4
SHC1P29353 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.31□□□□□ -1.4
SHC1P29353 VN2R1P-201ENST00000449668 1743 ntBASIC6.31□□□□□ -1.4
SHC1P29353 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.31□□□□□ -1.4
SHC1P29353 RNU12-2P-201ENST00000364789 156 ntBASIC6.31□□□□□ -1.4
SHC1P29353 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHC1P29353 AL117344.1-201ENST00000407196 616 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AL139100.1-201ENST00000408001 498 ntBASIC6.31□□□□□ -1.4
SHC1P29353 RNA5SP280-201ENST00000411230 115 ntBASIC6.31□□□□□ -1.4
SHC1P29353 RPS14P4-201ENST00000415880 418 ntBASIC6.31□□□□□ -1.4
SHC1P29353 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 PHB2P1-201ENST00000434943 890 ntBASIC6.31□□□□□ -1.4
SHC1P29353 HMGN1P6-201ENST00000438508 291 ntBASIC6.31□□□□□ -1.4
SHC1P29353 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.31□□□□□ -1.4
SHC1P29353 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 AL034399.1-201ENST00000451535 380 ntBASIC6.31□□□□□ -1.4
SHC1P29353 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 SETP4-201ENST00000455717 868 ntBASIC6.31□□□□□ -1.4
SHC1P29353 SRP68P2-201ENST00000456184 254 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AC010878.1-201ENST00000456500 1047 ntBASIC6.31□□□□□ -1.4
SHC1P29353 RPL34P34-201ENST00000465389 354 ntBASIC6.31□□□□□ -1.4
SHC1P29353 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.31□□□□□ -1.4
SHC1P29353 TECRP2-201ENST00000503270 928 ntBASIC6.31□□□□□ -1.4
SHC1P29353 OR10J9P-201ENST00000511932 987 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.31□□□□□ -1.4
SHC1P29353 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.31□□□□□ -1.4
SHC1P29353 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 MIR4428-201ENST00000584884 73 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SHC1P29353 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.31□□□□□ -1.4
SHC1P29353 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 AL512430.4-201ENST00000603085 613 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AC099777.1-201ENST00000603779 1070 ntBASIC6.31□□□□□ -1.4
SHC1P29353 AC024085.1-201ENST00000604299 432 ntBASIC6.31□□□□□ -1.4
SHC1P29353 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.31□□□□□ -1.4
SHC1P29353 AC243725.1-201ENST00000637164 436 ntBASIC6.31□□□□□ -1.4
SHC1P29353 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 UGT2B27P-201ENST00000505092 1620 ntBASIC6.31□□□□□ -1.4
SHC1P29353 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.31□□□□□ -1.4
SHC1P29353 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 AL359195.2-201ENST00000623657 4412 ntBASIC6.31□□□□□ -1.4
SHC1P29353 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.31□□□□□ -1.4
SHC1P29353 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.31□□□□□ -1.4
SHC1P29353 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 AC104837.1-201ENST00000444644 1587 ntBASIC6.31□□□□□ -1.4
SHC1P29353 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHC1P29353 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHC1P29353 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.31□□□□□ -1.4
SHC1P29353 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.3□□□□□ -1.4
SHC1P29353 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 TATDN2P3-201ENST00000452855 3665 ntBASIC6.3□□□□□ -1.4
SHC1P29353 CLCA3P-203ENST00000490028 2781 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AL591848.4-201ENST00000567832 3472 ntBASIC6.3□□□□□ -1.4
SHC1P29353 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHC1P29353 ASNSP6-201ENST00000592770 1618 ntBASIC6.3□□□□□ -1.4
SHC1P29353 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 RNA5SP429-201ENST00000363688 109 ntBASIC6.3□□□□□ -1.4
SHC1P29353 RN7SKP62-201ENST00000384539 329 ntBASIC6.3□□□□□ -1.4
SHC1P29353 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 RPL9P21-201ENST00000392269 505 ntBASIC6.3□□□□□ -1.4
SHC1P29353 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHC1P29353 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.3□□□□□ -1.4
SHC1P29353 PSMC1P2-201ENST00000423961 1204 ntBASIC6.3□□□□□ -1.4
SHC1P29353 AC009362.1-201ENST00000427253 406 ntBASIC6.3□□□□□ -1.4
SHC1P29353 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms