Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CR382285.1-202ENST00000604687 547 ntBASIC7.9□□□□□ -1.15
POLR2AP24928 AP005431.1-201ENST00000618479 319 ntBASIC7.9□□□□□ -1.15
POLR2AP24928 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.15
POLR2AP24928 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 SPATA31C2-201ENST00000324915 3777 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 RANP6-201ENST00000413691 644 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.89□□□□□ -1.15
POLR2AP24928 GSTA6P-201ENST00000424144 582 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC104843.2-201ENST00000427666 297 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.89□□□□□ -1.15
POLR2AP24928 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC027369.2-201ENST00000528030 440 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 ULK4P1-202ENST00000565174 503 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.89□□□□□ -1.15
POLR2AP24928 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC233702.7-202ENST00000582941 211 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 AC073389.3-201ENST00000609434 935 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 AC087821.1-201ENST00000623639 567 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.89□□□□□ -1.15
POLR2AP24928 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
POLR2AP24928 AP000542.3-201ENST00000623391 6114 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 IPO7P2-201ENST00000451446 1750 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.89□□□□□ -1.15
POLR2AP24928 UBTFL11-201ENST00000428234 2252 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 RPL31P11-201ENST00000426558 1558 ntBASIC7.89□□□□□ -1.15
POLR2AP24928 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
POLR2AP24928 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.88□□□□□ -1.15
POLR2AP24928 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC002127.1-201ENST00000421305 225 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 AL121916.1-201ENST00000429405 308 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.88□□□□□ -1.15
POLR2AP24928 AC005632.2-201ENST00000564271 828 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 AL133445.2-201ENST00000611191 527 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 AL391262.2-201ENST00000622466 494 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
POLR2AP24928 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.88□□□□□ -1.15
POLR2AP24928 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 AC016582.1-202ENST00000636341 2982 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 AP003486.1-201ENST00000525716 3994 ntBASIC7.88□□□□□ -1.15
POLR2AP24928 ERG-210ENST00000442448 5034 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.88□□□□□ -1.15
POLR2AP24928 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.88□□□□□ -1.15
POLR2AP24928 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
POLR2AP24928 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms