Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 AL359263.1-201ENST00000441188 2796 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 RPSAP60-201ENST00000415403 880 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.51□□□□□ -1.37
SCN2BO60939 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC010878.1-201ENST00000456500 1047 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 RN7SL145P-201ENST00000469955 296 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN2BO60939 RN7SL561P-201ENST00000488553 281 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC063943.2-201ENST00000495697 534 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC100854.1-201ENST00000520351 341 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC087752.2-201ENST00000521219 281 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN2BO60939 NXPE2P1-201ENST00000543705 726 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.51□□□□□ -1.37
SCN2BO60939 SIGLEC31P-201ENST00000594237 551 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC092032.1-201ENST00000603090 165 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC104117.5-201ENST00000606195 547 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AC012640.3-201ENST00000607847 430 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 AC016590.3-201ENST00000611171 753 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 AP005212.3-201ENST00000619964 528 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SCN2BO60939 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 AL033543.1-201ENST00000623440 13454 ntBASIC6.51□□□□□ -1.37
SCN2BO60939 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN2BO60939 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN2BO60939 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.5□□□□□ -1.37
SCN2BO60939 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.5□□□□□ -1.37
SCN2BO60939 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SCN2BO60939 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SCN2BO60939 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SCN2BO60939 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 NHP2P2-201ENST00000396362 460 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AL359715.1-201ENST00000404330 555 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 RPSAP44-201ENST00000406712 884 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.5□□□□□ -1.37
SCN2BO60939 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AC134879.1-201ENST00000426062 394 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SCN2BO60939 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 ATP5LP4-201ENST00000434169 307 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 ANXA2P2-201ENST00000435128 1020 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC005517.1-201ENST00000452091 489 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 MED28P7-201ENST00000456611 530 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 SNORA35.1-201ENST00000458908 128 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCN2BO60939 RN7SKP11-201ENST00000517018 287 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 VDAC2P2-201ENST00000544463 901 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.5□□□□□ -1.37
SCN2BO60939 AL049829.3-202ENST00000604278 711 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AC068234.2-201ENST00000619646 522 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.5□□□□□ -1.37
SCN2BO60939 AL356585.10-201ENST00000641883 123 ntBASIC6.5□□□□□ -1.37
SCN2BO60939 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms