Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 PABPC1P10-201ENST00000464731 381 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC018475.1-201ENST00000478358 465 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC079594.1-201ENST00000489757 331 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AP005202.1-201ENST00000489915 867 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC026826.1-201ENST00000493002 361 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 OR5D2P-201ENST00000524390 911 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 MIR4258-201ENST00000580920 91 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC061975.3-201ENST00000583209 244 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AL589765.5-201ENST00000596133 515 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 CYCSP1-201ENST00000604815 315 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC068234.2-201ENST00000619646 522 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 BX005040.2-201ENST00000620504 370 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC131009.3-201ENST00000621809 287 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AL451064.2-201ENST00000623514 1654 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 AL596244.1-201ENST00000567068 3779 ntBASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 AL356361.1-201ENST00000400943 1459 ntBASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDD3Q9Y3P4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 BX284613.1-201ENST00000452221 1641 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 RNU4-81P-201ENST00000363561 144 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 FTH1P26-201ENST00000406512 701 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 RN7SKP254-201ENST00000410685 310 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 NIP7P1-201ENST00000433227 512 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 SDHCP3-201ENST00000445371 506 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 RN7SL145P-201ENST00000469955 296 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 RPL23AP8-201ENST00000479812 475 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC079944.1-201ENST00000485426 495 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 GTF2IP11-201ENST00000526931 420 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 OR9L1P-201ENST00000529493 933 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AL591767.3-201ENST00000554632 525 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC015818.6-201ENST00000584274 634 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 PRR13P5-201ENST00000596581 442 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC016542.3-201ENST00000623520 619 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AC008957.3-201ENST00000624112 2242 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 AL591848.4-201ENST00000567832 3472 ntBASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDD3Q9Y3P4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms