Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 SOD1P1-201ENST00000407803 440 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 RN7SKP117-201ENST00000410175 264 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 GOT2P2-201ENST00000450663 1251 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 OR7E7P-201ENST00000455678 1012 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 RPL23AP68-201ENST00000480924 445 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 RN7SL776P-201ENST00000493390 268 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL132640.2-202ENST00000559732 614 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 MIR3159-201ENST00000584572 74 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC011447.2-201ENST00000592921 283 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AL035417.2-201ENST00000603887 796 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 MIR6774-201ENST00000614651 70 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC027506.1-201ENST00000621395 198 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC007347.2-201ENST00000623044 180 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 SNX18P10-201ENST00000625014 519 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 FO082842.1-201ENST00000423552 1370 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 TNPO1P2-201ENST00000426249 2665 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 SNORA70G-201ENST00000383923 142 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MIR431-201ENST00000385266 114 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC007365.2-201ENST00000428806 458 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 RPL23AP80-201ENST00000495605 424 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 MIR4800-201ENST00000537353 80 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC140063.1-201ENST00000541343 259 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AP006587.6-201ENST00000582128 1091 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 RN7SL697P-201ENST00000582484 299 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AC023206.1-201ENST00000605824 298 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AP002345.2-201ENST00000609961 904 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AL031777.2-201ENST00000611953 196 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 AL354702.2-202ENST00000641481 890 ntBASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO3Q9BXY4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms