Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC126365.2-201ENST00000580630 379 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC007262.1-201ENST00000604099 321 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL139022.2-201ENST00000606934 443 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC022743.1-201ENST00000624990 664 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC016582.3-206ENST00000636547 207 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 SF3A3P1-201ENST00000446317 1477 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL391380.1-201ENST00000439300 1432 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC015871.3-201ENST00000618835 2261 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 RN7SKP63-201ENST00000363187 301 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 RN7SKP131-201ENST00000410698 301 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 VN1R66P-201ENST00000412929 916 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 GEMIN2P2-201ENST00000418195 715 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL593856.1-201ENST00000419949 805 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL645936.2-201ENST00000430565 928 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 MYO5BP3-201ENST00000431872 1279 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL451063.1-201ENST00000450164 1133 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL929410.2-201ENST00000451170 189 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC146944.3-201ENST00000509969 371 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AP001124.1-201ENST00000529628 385 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC009268.1-201ENST00000561352 1203 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 OR5AH1P-201ENST00000595968 283 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC087468.1-201ENST00000604365 630 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC110769.3-201ENST00000624567 1173 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 AC009135.2-201ENST00000624136 1768 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.57□□□□□ -1.36
SNX18Q96RF0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SNX18Q96RF0 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SNX18Q96RF0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms