Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AL589993.1-201ENST00000407450 2524 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RN7SKP271-201ENST00000410528 320 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RPLP1P10-201ENST00000413972 339 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 PSMC1P2-201ENST00000423961 1204 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ETF1P1-206ENST00000427296 984 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RPL3P11-201ENST00000434028 1146 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 MEF2AP1-201ENST00000454867 863 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RN7SL372P-201ENST00000461982 298 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RN7SL655P-201ENST00000486087 298 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RN7SL187P-201ENST00000495587 303 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC021220.1-201ENST00000507445 630 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AP005902.2-201ENST00000518393 307 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 MIR6774-201ENST00000614651 70 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 AL451064.2-201ENST00000623514 1654 ntBASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
C9orf40Q8IXQ3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 RN7SKP130-201ENST00000364924 301 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LDHAP5-201ENST00000394996 622 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 CDK7P1-201ENST00000434574 693 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 BMS1P11-201ENST00000442351 885 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 RBMY3AP-201ENST00000449381 1145 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AL390728.3-201ENST00000452704 270 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 BMS1P9-201ENST00000457640 885 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 RN7SL216P-201ENST00000471607 298 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC021146.11-201ENST00000503319 491 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 CTSLP2-201ENST00000580501 394 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC022001.1-201ENST00000605193 268 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AL137000.1-201ENST00000610528 1244 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AC005858.3-201ENST00000624756 589 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms