Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NR1H5P-201ENST00000452683 1377 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 DDX18P5-201ENST00000534547 1306 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 OLA1P1-201ENST00000396387 1189 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC020983.1-201ENST00000417063 543 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ST13P13-201ENST00000417082 1092 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AL449283.1-202ENST00000418249 604 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RPL19P21-201ENST00000424919 591 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 METTL8P1-201ENST00000428182 611 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC007790.1-201ENST00000439081 782 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AL136452.1-201ENST00000448495 439 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC018892.2-201ENST00000457656 693 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RN7SL508P-201ENST00000464472 303 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NDUFS5P2-201ENST00000484004 306 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC117392.1-201ENST00000487061 596 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RN7SL205P-201ENST00000490174 284 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC023794.3-204ENST00000510754 236 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ADI1P3-201ENST00000549509 470 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 OR4N1P-201ENST00000554847 949 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 MIR4262-201ENST00000578394 54 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 OOSP1P2-201ENST00000579644 351 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RN7SL473P-201ENST00000580341 299 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SLC20A1P2-201ENST00000618036 966 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC134981.1-201ENST00000628076 348 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC068860.1-201ENST00000623701 3736 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 GUCY2GP-201ENST00000479705 3222 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ZNF969P-201ENST00000510345 2341 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms