Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
H3F3AP84243 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.21□□□□□ -1.42
H3F3AP84243 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
H3F3AP84243 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
H3F3AP84243 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 ATP5BP1-201ENST00000411980 1574 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
H3F3AP84243 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
H3F3AP84243 AC074375.1-201ENST00000372993 192 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 DUTP4-201ENST00000424782 475 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 AC026254.2-201ENST00000475295 371 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 RN7SL259P-201ENST00000478499 253 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 RN7SL143P-201ENST00000496780 297 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 AC007537.1-201ENST00000539347 327 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 NXPE2P1-201ENST00000543705 726 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AC011611.6-201ENST00000547483 255 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AC016144.1-201ENST00000548175 1087 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 AC244034.2-201ENST00000562504 509 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 FCGR1CP-201ENST00000579737 1127 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 MIR378H-201ENST00000579966 83 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 GTF2IP6-201ENST00000583143 541 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AC090774.2-201ENST00000584708 322 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AC087575.1-201ENST00000585087 229 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 AL121985.3-201ENST00000620690 523 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 OR2A3P-202ENST00000641249 1776 ntBASIC6.2□□□□□ -1.42
H3F3AP84243 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3AP84243 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3AP84243 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
H3F3AP84243 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
H3F3AP84243 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H3F3AP84243 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H3F3AP84243 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3AP84243 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC009518.3-201ENST00000438972 253 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC083806.1-201ENST00000468934 316 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 PPP1R2P6-201ENST00000478565 588 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 AC073648.3-201ENST00000504939 925 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms