Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.83□□□□□ -1.48
CDX1P47902 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC5.83□□□□□ -1.48
CDX1P47902 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC5.83□□□□□ -1.48
CDX1P47902 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.83□□□□□ -1.48
CDX1P47902 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 HNRNPA1P67-201ENST00000604027 926 ntBASIC5.83□□□□□ -1.48
CDX1P47902 AL451085.1-201ENST00000604546 690 ntBASIC5.83□□□□□ -1.48
CDX1P47902 AC080112.3-201ENST00000612552 880 ntBASIC5.83□□□□□ -1.48
CDX1P47902 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.83□□□□□ -1.48
CDX1P47902 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDX1P47902 AC007204.1-201ENST00000621794 555 ntBASIC5.83□□□□□ -1.48
CDX1P47902 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDX1P47902 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.83□□□□□ -1.48
CDX1P47902 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDX1P47902 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDX1P47902 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.83□□□□□ -1.48
CDX1P47902 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDX1P47902 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDX1P47902 WASF5P-205ENST00000428639 1455 ntBASIC5.83□□□□□ -1.48
CDX1P47902 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
CDX1P47902 MKI67P1-201ENST00000604297 1460 ntBASIC5.83□□□□□ -1.48
CDX1P47902 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.83□□□□□ -1.48
CDX1P47902 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 AL391380.1-201ENST00000439300 1432 ntBASIC5.82□□□□□ -1.48
CDX1P47902 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 OLMALINC-203ENST00000641087 3779 ntBASIC5.82□□□□□ -1.48
CDX1P47902 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDX1P47902 AC062029.1-202ENST00000606164 3651 ntBASIC5.82□□□□□ -1.48
CDX1P47902 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 SOCS5P5-201ENST00000402732 1586 ntBASIC5.82□□□□□ -1.48
CDX1P47902 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 RN7SKP63-201ENST00000363187 301 ntBASIC5.82□□□□□ -1.48
CDX1P47902 SNORA73B-201ENST00000363217 204 ntBASIC5.82□□□□□ -1.48
CDX1P47902 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 SSX6-201ENST00000376932 562 ntBASIC5.82□□□□□ -1.48
CDX1P47902 RN7SKP131-201ENST00000410698 301 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 AC127537.1-201ENST00000418183 748 ntBASIC5.82□□□□□ -1.48
CDX1P47902 RAC1P4-201ENST00000419413 579 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 UBE2V2P3-201ENST00000433562 437 ntBASIC5.82□□□□□ -1.48
CDX1P47902 ATP5LP4-201ENST00000434169 307 ntBASIC5.82□□□□□ -1.48
CDX1P47902 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 SS18L2P1-201ENST00000445923 213 ntBASIC5.82□□□□□ -1.48
CDX1P47902 RPL24P8-201ENST00000446071 474 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AL451074.4-201ENST00000447545 470 ntBASIC5.82□□□□□ -1.48
CDX1P47902 CDC42P2-201ENST00000448566 569 ntBASIC5.82□□□□□ -1.48
CDX1P47902 PGBD4P1-201ENST00000473644 407 ntBASIC5.82□□□□□ -1.48
CDX1P47902 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.82□□□□□ -1.48
CDX1P47902 AC016559.1-201ENST00000511420 199 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.82□□□□□ -1.48
CDX1P47902 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.82□□□□□ -1.48
CDX1P47902 RN7SKP242-201ENST00000515967 289 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 AC018523.1-201ENST00000534211 512 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.82□□□□□ -1.48
CDX1P47902 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 MIR5095-201ENST00000578844 88 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.82□□□□□ -1.48
CDX1P47902 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 AL390058.1-201ENST00000603834 629 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.82□□□□□ -1.48
CDX1P47902 AL138960.1-201ENST00000613838 513 ntBASIC5.82□□□□□ -1.48
CDX1P47902 AC243830.2-201ENST00000618067 630 ntBASIC5.82□□□□□ -1.48
CDX1P47902 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 DDX10P2-201ENST00000417796 2614 ntBASIC5.82□□□□□ -1.48
CDX1P47902 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 CDY11P-201ENST00000447168 1651 ntBASIC5.82□□□□□ -1.48
CDX1P47902 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDX1P47902 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CDX1P47902 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.82□□□□□ -1.48
CDX1P47902 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDX1P47902 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms