Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.45□□□□□ -1.38
RFC3P40938 AC137695.2-201ENST00000603123 754 ntBASIC6.45□□□□□ -1.38
RFC3P40938 AC020765.1-201ENST00000604296 328 ntBASIC6.45□□□□□ -1.38
RFC3P40938 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.45□□□□□ -1.38
RFC3P40938 AC073263.3-201ENST00000624449 858 ntBASIC6.45□□□□□ -1.38
RFC3P40938 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 AC138915.4-201ENST00000565549 4147 ntBASIC6.45□□□□□ -1.38
RFC3P40938 ZNF658B-201ENST00000602828 3408 ntBASIC6.45□□□□□ -1.38
RFC3P40938 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
RFC3P40938 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC3P40938 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RFC3P40938 RNA5SP176-201ENST00000390956 110 ntBASIC6.44□□□□□ -1.38
RFC3P40938 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 RPL18AP14-201ENST00000417685 526 ntBASIC6.44□□□□□ -1.38
RFC3P40938 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RFC3P40938 SNRPEP5-201ENST00000425442 278 ntBASIC6.44□□□□□ -1.38
RFC3P40938 AC104698.1-201ENST00000435671 276 ntBASIC6.44□□□□□ -1.38
RFC3P40938 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 AL583856.1-201ENST00000454078 1101 ntBASIC6.44□□□□□ -1.38
RFC3P40938 SNORA81.1-201ENST00000458922 177 ntBASIC6.44□□□□□ -1.38
RFC3P40938 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 AP000805.1-201ENST00000471604 784 ntBASIC6.44□□□□□ -1.38
RFC3P40938 AC023818.1-201ENST00000498379 384 ntBASIC6.44□□□□□ -1.38
RFC3P40938 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.44□□□□□ -1.38
RFC3P40938 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 MIR4312-201ENST00000579909 76 ntBASIC6.44□□□□□ -1.38
RFC3P40938 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 PRR13P5-201ENST00000596581 442 ntBASIC6.44□□□□□ -1.38
RFC3P40938 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 U91328.4-201ENST00000608919 517 ntBASIC6.44□□□□□ -1.38
RFC3P40938 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 AC073488.2-201ENST00000631903 751 ntBASIC6.44□□□□□ -1.38
RFC3P40938 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 AC079248.1-201ENST00000427568 1546 ntBASIC6.44□□□□□ -1.38
RFC3P40938 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RFC3P40938 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.44□□□□□ -1.38
RFC3P40938 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.44□□□□□ -1.38
RFC3P40938 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFC3P40938 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 RBPJP6-201ENST00000411556 1431 ntBASIC6.43□□□□□ -1.38
RFC3P40938 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.43□□□□□ -1.38
RFC3P40938 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 AC004023.1-201ENST00000561473 1744 ntBASIC6.43□□□□□ -1.38
RFC3P40938 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 RN7SKP107-201ENST00000364157 290 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.43□□□□□ -1.38
RFC3P40938 FAM204BP-201ENST00000369171 701 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.43□□□□□ -1.38
RFC3P40938 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.43□□□□□ -1.38
RFC3P40938 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.43□□□□□ -1.38
RFC3P40938 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFC3P40938 RPL5P6-201ENST00000425640 886 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.43□□□□□ -1.38
RFC3P40938 VN1R6P-201ENST00000458417 907 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC096922.1-201ENST00000461635 651 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.43□□□□□ -1.38
RFC3P40938 MTND6P8-201ENST00000503471 522 ntBASIC6.43□□□□□ -1.38
RFC3P40938 DCAF13P2-201ENST00000514188 555 ntBASIC6.43□□□□□ -1.38
RFC3P40938 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.43□□□□□ -1.38
RFC3P40938 AC018558.5-201ENST00000565840 952 ntBASIC6.43□□□□□ -1.38
RFC3P40938 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms