Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.99□□□□□ -1.13
COL4A5P29400 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC084782.1-201ENST00000564401 2465 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC018717.1-201ENST00000457712 1505 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC7.99□□□□□ -1.13
COL4A5P29400 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 MIR130B-202ENST00000385018 82 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.98□□□□□ -1.13
COL4A5P29400 MTND6P1-201ENST00000417434 424 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 AC097463.1-201ENST00000447288 481 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 RPL23AP64-201ENST00000469465 435 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 GLRXP3-201ENST00000470810 321 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
COL4A5P29400 RPS10P20-201ENST00000494130 463 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 NPIPB1P-202ENST00000588786 828 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC092266.1-201ENST00000610958 165 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 CDY10P-201ENST00000452415 1567 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 AL590762.1-201ENST00000391782 432 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 RN7SKP296-201ENST00000411185 341 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 SLC20A1P1-201ENST00000413906 956 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC112492.2-201ENST00000432774 1030 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 RPL23AP19-201ENST00000436229 369 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AC009963.3-201ENST00000458090 486 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 RPS4XP23-201ENST00000487801 237 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 RPL19P11-201ENST00000495944 589 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.98□□□□□ -1.13
COL4A5P29400 AC068305.2-201ENST00000550567 1205 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 MRPS21P8-201ENST00000569196 235 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 AC026367.2-201ENST00000610630 553 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
COL4A5P29400 U1.41-201ENST00000617626 165 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 CIR1P2-201ENST00000514821 1342 ntBASIC7.98□□□□□ -1.13
COL4A5P29400 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL4A5P29400 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.98□□□□□ -1.13
COL4A5P29400 TNC-210ENST00000535648 7508 ntTSL 5 BASIC7.98□□□□□ -1.13
COL4A5P29400 AP003486.1-201ENST00000525716 3994 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 HCG18-244ENST00000602516 2890 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.97□□□□□ -1.13
COL4A5P29400 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
COL4A5P29400 RN7SKP81-201ENST00000365603 331 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
COL4A5P29400 MTND6P12-201ENST00000428247 522 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 AL590004.3-202ENST00000445883 451 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.97□□□□□ -1.13
COL4A5P29400 AC108103.1-201ENST00000511286 446 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 MTATP6P1-201ENST00000514057 681 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms