Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 AF305872.1-201ENST00000485217 471 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 RN7SKP105-201ENST00000517192 314 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 SNX18P27-201ENST00000523611 779 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.72□□□□□ -1.01
ERCC3P19447 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC8.72□□□□□ -1.01
ERCC3P19447 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.72□□□□□ -1.01
ERCC3P19447 AP001554.1-201ENST00000604533 376 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AL136139.1-201ENST00000605568 222 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AC112503.1-201ENST00000608436 391 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AL391903.2-201ENST00000614532 247 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AC126544.2-201ENST00000625174 749 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 RPL31P11-201ENST00000426558 1558 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 AL359396.1-201ENST00000623151 2376 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
ERCC3P19447 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 AC020904.2-202ENST00000614660 1401 ntBASIC8.71□□□□□ -1.01
ERCC3P19447 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.71□□□□□ -1.01
ERCC3P19447 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.71□□□□□ -1.01
ERCC3P19447 AC105046.1-201ENST00000566457 4997 ntBASIC8.71□□□□□ -1.01
ERCC3P19447 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
ERCC3P19447 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
ERCC3P19447 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.71□□□□□ -1.01
ERCC3P19447 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
ERCC3P19447 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
ERCC3P19447 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 RN7SKP63-201ENST00000363187 301 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 GAS8-AS1-201ENST00000408886 435 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 RN7SKP131-201ENST00000410698 301 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 GSTA10P-201ENST00000412182 576 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AF274573.1-201ENST00000430535 494 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.71□□□□□ -1.02
ERCC3P19447 TPTE2P3-201ENST00000441562 1189 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 RPS7P4-201ENST00000444127 582 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 TDGF1P6-201ENST00000463873 448 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 CBX5P1-201ENST00000468470 561 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 RN7SL688P-201ENST00000471754 275 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 RPS3AP6-201ENST00000484430 795 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 FTH1P23-201ENST00000492727 550 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC122714.1-201ENST00000502510 459 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC021146.5-201ENST00000503544 545 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 FAM177A1P1-201ENST00000503598 473 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC008629.3-201ENST00000505786 586 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.71□□□□□ -1.02
ERCC3P19447 FAM30C-201ENST00000561158 410 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 MIR378H-201ENST00000579966 83 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.71□□□□□ -1.02
ERCC3P19447 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC069431.2-201ENST00000604149 1099 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AL022238.3-201ENST00000609279 443 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 MIR8082-201ENST00000612488 81 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC078880.5-201ENST00000617845 421 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC090617.9-201ENST00000623751 147 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 AC019080.5-201ENST00000624891 757 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC8.71□□□□□ -1.02
ERCC3P19447 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.71□□□□□ -1.02
ERCC3P19447 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 269.1 ms