Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.36□□□□□ -1.39
SPTA1P02549 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC008410.1-201ENST00000483777 339 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AC007537.1-201ENST00000539347 327 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 CYCSP38-201ENST00000559840 322 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC008521.2-201ENST00000591021 259 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC098590.2-201ENST00000614787 281 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 RAB28P4-201ENST00000622233 665 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AL109924.4-201ENST00000623089 670 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 MAPK10-279ENST00000641157 2449 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC104966.1-201ENST00000467010 1464 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SPTA1P02549 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.35□□□□□ -1.39
SPTA1P02549 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC6.35□□□□□ -1.39
SPTA1P02549 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 RN7SKP23-201ENST00000625159 4301 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 AL359715.1-201ENST00000404330 555 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 AC110602.1-201ENST00000437414 318 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 TDGP1-201ENST00000543961 1229 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 AC090826.1-203ENST00000569235 490 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.35□□□□□ -1.39
SPTA1P02549 MIR6127-201ENST00000614019 109 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SPTA1P02549 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC005614.1-201ENST00000598952 3653 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 PSMA6P1-201ENST00000400275 741 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.35□□□□□ -1.39
SPTA1P02549 AC073429.2-201ENST00000569694 1444 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 RN7SL178P-201ENST00000582930 304 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.35□□□□□ -1.39
SPTA1P02549 SDR42E1P1-201ENST00000611327 477 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 AC099667.1-201ENST00000624222 469 ntBASIC6.35□□□□□ -1.39
SPTA1P02549 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.35□□□□□ -1.39
SPTA1P02549 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPTA1P02549 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 ATP5BP1-201ENST00000411980 1574 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 RN7SKP130-201ENST00000364924 301 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.34□□□□□ -1.39
SPTA1P02549 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 COL11A2P1-205ENST00000441798 676 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.34□□□□□ -1.39
SPTA1P02549 VPS25P1-201ENST00000455691 508 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.34□□□□□ -1.39
SPTA1P02549 AC015801.1-201ENST00000585651 153 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 AL589765.6-201ENST00000601909 549 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms