Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 U91328.4-201ENST00000608919 517 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 TMEM75-201ENST00000624314 2165 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 TPTE2P2-201ENST00000403471 1466 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC011592.1-201ENST00000624647 3634 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 RNU6-1017P-201ENST00000363613 106 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 RN7SKP148-201ENST00000410179 275 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC007365.2-201ENST00000428806 458 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 HMGN1P32-201ENST00000441744 256 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 BMS1P11-201ENST00000442351 885 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 SDHCP3-201ENST00000445371 506 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 PRDX1P1-201ENST00000449329 596 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 PPIAP32-201ENST00000449940 472 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 BMS1P9-201ENST00000457640 885 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC063955.1-201ENST00000462872 685 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC131935.1-201ENST00000524621 333 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC010287.1-201ENST00000566916 357 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AL365223.1-201ENST00000574864 1297 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC068408.1-201ENST00000577406 1144 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AL049541.2-201ENST00000626377 555 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC135068.11-201ENST00000636378 921 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 AC016251.2-201ENST00000623393 3089 ntBASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CLIP2Q9UDT6 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC127070.3-201ENST00000503695 3263 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC006511.2-201ENST00000388966 660 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 RPL18AP14-201ENST00000417685 526 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AL672212.1-201ENST00000422246 400 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC112225.1-201ENST00000508230 297 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 IGLC4-201ENST00000517690 248 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 OR5BK1P-201ENST00000550421 823 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 IGLJCOR18-201ENST00000584002 424 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 AC013731.1-201ENST00000604340 883 ntBASIC8.23□□□□□ -1.09
CLIP2Q9UDT6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms