Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NHLRC1Q6VVB1 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NHLRC1Q6VVB1 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NHLRC1Q6VVB1 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
NHLRC1Q6VVB1 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TPTE2P2-201ENST00000403471 1466 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 RNU1-24P-201ENST00000364285 165 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PPIL1P1-201ENST00000423936 499 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC092421.1-201ENST00000448148 418 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 GAPDHP53-201ENST00000458397 924 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 RN7SL149P-201ENST00000465197 281 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 RPL5P15-201ENST00000475870 897 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ENPP7P3-201ENST00000509123 241 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 OR4A21P-201ENST00000532759 944 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC126177.6-201ENST00000550420 1009 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC090971.3-201ENST00000557871 1041 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 IGLJCOR18-201ENST00000584002 424 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC005070.2-201ENST00000604391 260 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 MIR6731-201ENST00000614863 72 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC087894.3-201ENST00000623682 349 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 DDX43P1-201ENST00000510713 1763 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AL596244.1-201ENST00000567068 3779 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.3□□□□□ -1.4
NHLRC1Q6VVB1 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OR52B5P-204ENST00000641744 3467 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 PABPC1P8-201ENST00000452851 2086 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC004014.2-201ENST00000623718 5122 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 RNU6-1017P-201ENST00000363613 106 ntBASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.29□□□□□ -1.4
NHLRC1Q6VVB1 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms