Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RPL10P6-201ENST00000457497 318 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 RN7SL621P-201ENST00000472565 299 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 RN7SL241P-201ENST00000482973 236 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.32□□□□□ -1.24
COL6A2P12110 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 OR7A8P-201ENST00000595427 913 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 AF230666.2-201ENST00000602328 725 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC129492.5-201ENST00000603489 315 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.32□□□□□ -1.24
COL6A2P12110 ELOCP35-201ENST00000604289 336 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC004801.6-201ENST00000616571 978 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC005383.1-201ENST00000622689 534 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AL078595.3-201ENST00000623815 1166 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC069542.2-201ENST00000624816 216 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AC019226.2-201ENST00000625973 424 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.32□□□□□ -1.24
COL6A2P12110 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL6A2P12110 HCCAT5-202ENST00000642127 1029 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 AC090643.1-201ENST00000623600 3100 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 ZNF658B-201ENST00000602828 3408 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 AC007938.1-201ENST00000562524 2902 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 AL133243.4-201ENST00000623116 3109 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 RNU6-792P-201ENST00000363490 107 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL6A2P12110 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 RPL4P4-201ENST00000422486 1284 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC092634.2-201ENST00000428146 1010 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 MTCO2P20-201ENST00000437339 673 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 AL513321.1-201ENST00000441175 761 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 FUNDC2P2-202ENST00000443452 493 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 Z77249.1-201ENST00000444622 1175 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AL135929.1-201ENST00000449287 552 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC104164.3-201ENST00000467363 1258 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC040975.1-201ENST00000472104 316 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC015820.1-201ENST00000473882 321 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC093663.2-201ENST00000484625 313 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.31□□□□□ -1.24
COL6A2P12110 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL6A2P12110 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC146944.3-201ENST00000509969 371 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC027801.3-201ENST00000515049 698 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AP003355.1-201ENST00000518956 587 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 OR5F2P-201ENST00000532761 941 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC084824.2-201ENST00000548906 345 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.31□□□□□ -1.24
COL6A2P12110 AGGF1P5-201ENST00000567900 919 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.31□□□□□ -1.24
COL6A2P12110 AL365223.1-201ENST00000574864 1297 ntBASIC7.31□□□□□ -1.24
COL6A2P12110 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.31□□□□□ -1.24
COL6A2P12110 AC018737.1-201ENST00000603900 204 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms