Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC107956.2-201ENST00000496042 454 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC114801.1-201ENST00000512633 297 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AP006587.5-201ENST00000532033 739 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC136944.5-201ENST00000573021 151 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 RN7SL199P-201ENST00000578752 281 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 RN7SL656P-201ENST00000579044 281 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 RN7SL404P-201ENST00000582421 281 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 BX005195.1-201ENST00000618097 1198 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC090099.1-204ENST00000623626 849 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC005785.2-201ENST00000624655 631 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 AC119674.1-209ENST00000642031 997 ntBASIC5.92□□□□□ -1.46
HLA-DQB1P01920 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQB1P01920 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC096992.2-201ENST00000609553 1684 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RNA5SP448-201ENST00000363151 111 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RNA5SP65-201ENST00000363166 119 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RNU1-21P-201ENST00000363327 163 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RN7SKP211-201ENST00000363328 315 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 VN1R33P-201ENST00000411800 887 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RPS26P38-201ENST00000414476 348 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC002367.1-201ENST00000416765 405 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 RPL6P2-201ENST00000425480 783 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC097721.1-201ENST00000427150 1253 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 LSM3P3-201ENST00000436601 306 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC002553.1-201ENST00000442828 802 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC127024.1-201ENST00000490847 418 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC008040.4-201ENST00000494834 768 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AP005639.1-201ENST00000526939 192 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC004232.1-201ENST00000571388 208 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC096708.2-201ENST00000577676 512 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 MIR5192-201ENST00000579892 92 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 MIR3159-201ENST00000584572 74 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AL023806.2-201ENST00000603042 263 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC108451.2-201ENST00000603875 538 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC012653.2-201ENST00000621880 420 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AC106795.5-201ENST00000623288 454 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AP001153.1-201ENST00000641024 338 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AL513523.1-201ENST00000417868 1309 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 AL606490.2-201ENST00000457562 1330 ntBASIC5.91□□□□□ -1.46
HLA-DQB1P01920 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB1P01920 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms