Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GPC6Q9Y625 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC6Q9Y625 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC6Q9Y625 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 AC007322.4-201ENST00000509611 723 ntBASIC18.78■□□□□ 0.6
GPC6Q9Y625 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 DUX4L16-201ENST00000555130 1264 ntBASIC18.78■□□□□ 0.6
GPC6Q9Y625 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC6Q9Y625 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC6Q9Y625 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GPC6Q9Y625 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC6Q9Y625 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC6Q9Y625 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC6Q9Y625 DPP3P2-201ENST00000416030 1696 ntBASIC18.77■□□□□ 0.6
GPC6Q9Y625 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 AC004911.1-201ENST00000416316 871 ntBASIC18.77■□□□□ 0.6
GPC6Q9Y625 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.77■□□□□ 0.6
GPC6Q9Y625 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
GPC6Q9Y625 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC6Q9Y625 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GPC6Q9Y625 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GPC6Q9Y625 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
GPC6Q9Y625 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 AC092666.2-201ENST00000613287 246 ntBASIC18.76■□□□□ 0.59
GPC6Q9Y625 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms