Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN1Q9P244 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN1Q9P244 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN1Q9P244 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN1Q9P244 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN1Q9P244 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN1Q9P244 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 DPP3P2-201ENST00000416030 1696 ntBASIC18.31■□□□□ 0.52
LRFN1Q9P244 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 AC233702.5-201ENST00000584107 538 ntBASIC18.31■□□□□ 0.52
LRFN1Q9P244 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 AP001412.1-201ENST00000608405 714 ntBASIC18.31■□□□□ 0.52
LRFN1Q9P244 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN1Q9P244 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN1Q9P244 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.3■□□□□ 0.52
LRFN1Q9P244 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN1Q9P244 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN1Q9P244 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 AC092720.2-201ENST00000602388 1665 ntBASIC18.29■□□□□ 0.52
LRFN1Q9P244 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 NBPF21P-201ENST00000425093 1451 ntBASIC18.29■□□□□ 0.52
LRFN1Q9P244 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 RARRES2P10-201ENST00000564312 460 ntBASIC18.29■□□□□ 0.52
LRFN1Q9P244 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN1Q9P244 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN1Q9P244 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN1Q9P244 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.28■□□□□ 0.52
LRFN1Q9P244 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms