Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GDF3Q9NR23 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GDF3Q9NR23 AC069152.1-201ENST00000438030 544 ntBASIC21■□□□□ 0.95
GDF3Q9NR23 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21■□□□□ 0.95
GDF3Q9NR23 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GDF3Q9NR23 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21■□□□□ 0.95
GDF3Q9NR23 AC133041.1-202ENST00000642053 222 ntBASIC21■□□□□ 0.95
GDF3Q9NR23 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21■□□□□ 0.95
GDF3Q9NR23 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 TSPY20P-201ENST00000450910 630 ntBASIC20.99■□□□□ 0.95
GDF3Q9NR23 TERF1P5-201ENST00000477545 1207 ntBASIC20.99■□□□□ 0.95
GDF3Q9NR23 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF3Q9NR23 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF3Q9NR23 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
GDF3Q9NR23 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF3Q9NR23 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF3Q9NR23 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF3Q9NR23 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 AC073210.2-201ENST00000430369 194 ntBASIC20.96■□□□□ 0.95
GDF3Q9NR23 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms