Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP4-4Q9BYR3 HSP90B3P-201ENST00000415545 1567 ntBASIC4.19□□□□□ -1.74
KRTAP4-4Q9BYR3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 PIGN-214ENST00000589720 1853 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC016831.6-201ENST00000604514 1517 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 KRT18P24-201ENST00000344739 1156 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 Y_RNA.318-201ENST00000365131 97 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL136116.3-201ENST00000402907 1138 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL356320.2-201ENST00000417263 507 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AP000844.2-201ENST00000419440 509 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MTND1P14-201ENST00000427400 950 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MTND5P25-201ENST00000430499 799 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL590408.1-201ENST00000430905 453 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 ARPC3P1-201ENST00000437218 533 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 KCNMB2-AS1-204ENST00000437488 964 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC116366.2-201ENST00000454380 767 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MTATP6P14-201ENST00000455189 673 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 PABPC1P10-201ENST00000464731 381 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 NAMPTP2-201ENST00000505629 1115 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 THAP6-210ENST00000507557 542 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC131281.2-201ENST00000520478 145 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC006518.2-201ENST00000542513 940 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 SETP1-201ENST00000556014 845 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 HNRNPA1P5-201ENST00000558213 966 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC019171.1-201ENST00000601251 1056 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC015726.1-201ENST00000602353 681 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL031281.1-201ENST00000604049 488 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LARP7P1-201ENST00000605576 316 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 MIR4466-201ENST00000606121 54 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL139022.2-201ENST00000606934 443 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 U91328.4-201ENST00000608919 517 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC010997.5-201ENST00000609182 354 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC104073.3-201ENST00000610942 955 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL121757.2-201ENST00000611223 313 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC140725.3-201ENST00000616193 880 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC117500.5-201ENST00000623233 527 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC068787.1-201ENST00000623908 691 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC106733.1-201ENST00000624476 1038 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 RASSF1-AS1-201ENST00000629828 790 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms