Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBA1CQ9BQE3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 AC125437.2-201ENST00000625180 2167 ntBASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 TSPY6P-201ENST00000448518 926 ntBASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.76■□□□□ 0.59
TUBA1CQ9BQE3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AC005332.7-201ENST00000614046 2005 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 GUSBP6-202ENST00000438529 1198 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AF201337.1-201ENST00000520239 748 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AC105036.2-201ENST00000569468 176 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AC133552.2-202ENST00000575694 574 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 AL158211.5-201ENST00000623583 2518 ntBASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1CQ9BQE3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1CQ9BQE3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TUBA1CQ9BQE3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1CQ9BQE3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms