Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPNE1Q99829 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CPNE1Q99829 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 AC016769.1-201ENST00000409132 1010 ntBASIC19.91■□□□□ 0.78
CPNE1Q99829 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.91■□□□□ 0.78
CPNE1Q99829 KRT18P5-201ENST00000436075 1291 ntBASIC19.91■□□□□ 0.78
CPNE1Q99829 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.91■□□□□ 0.78
CPNE1Q99829 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE1Q99829 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE1Q99829 AC018445.3-201ENST00000624177 1945 ntBASIC19.91■□□□□ 0.78
CPNE1Q99829 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CPNE1Q99829 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CPNE1Q99829 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE1Q99829 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.9■□□□□ 0.78
CPNE1Q99829 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CPNE1Q99829 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 AC093484.2-201ENST00000580996 2166 ntBASIC19.9■□□□□ 0.78
CPNE1Q99829 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE1Q99829 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.9■□□□□ 0.78
CPNE1Q99829 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.9■□□□□ 0.78
CPNE1Q99829 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE1Q99829 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE1Q99829 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CPNE1Q99829 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE1Q99829 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE1Q99829 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE1Q99829 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CPNE1Q99829 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE1Q99829 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE1Q99829 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE1Q99829 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE1Q99829 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE1Q99829 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.89■□□□□ 0.77
CPNE1Q99829 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CPNE1Q99829 AP001271.2-201ENST00000624018 1556 ntBASIC19.89■□□□□ 0.77
CPNE1Q99829 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE1Q99829 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CPNE1Q99829 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CPNE1Q99829 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE1Q99829 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE1Q99829 AC087289.5-201ENST00000586076 3175 ntBASIC19.88■□□□□ 0.77
CPNE1Q99829 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CPNE1Q99829 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE1Q99829 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE1Q99829 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE1Q99829 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE1Q99829 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.88■□□□□ 0.77
CPNE1Q99829 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE1Q99829 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 CYP2T3P-201ENST00000601990 817 ntBASIC19.88■□□□□ 0.77
CPNE1Q99829 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE1Q99829 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE1Q99829 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE1Q99829 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CPNE1Q99829 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE1Q99829 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE1Q99829 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE1Q99829 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CPNE1Q99829 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CPNE1Q99829 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.87■□□□□ 0.77
CPNE1Q99829 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.87■□□□□ 0.77
CPNE1Q99829 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE1Q99829 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms