Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.85■□□□□ 0.93
CDCA3Q99618 AP000692.2-201ENST00000608391 879 ntBASIC20.85■□□□□ 0.93
CDCA3Q99618 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.85■□□□□ 0.93
CDCA3Q99618 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDCA3Q99618 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDCA3Q99618 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CDCA3Q99618 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA3Q99618 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA3Q99618 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDCA3Q99618 AC116351.2-201ENST00000606540 1585 ntBASIC20.85■□□□□ 0.93
CDCA3Q99618 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.84■□□□□ 0.93
CDCA3Q99618 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CDCA3Q99618 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.84■□□□□ 0.93
CDCA3Q99618 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 FAM8A6P-201ENST00000407496 1135 ntBASIC20.84■□□□□ 0.93
CDCA3Q99618 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDCA3Q99618 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.84■□□□□ 0.93
CDCA3Q99618 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.84■□□□□ 0.93
CDCA3Q99618 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
CDCA3Q99618 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDCA3Q99618 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CDCA3Q99618 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.83■□□□□ 0.93
CDCA3Q99618 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.83■□□□□ 0.93
CDCA3Q99618 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA3Q99618 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.83■□□□□ 0.93
CDCA3Q99618 AC130371.2-201ENST00000619443 611 ntBASIC20.83■□□□□ 0.93
CDCA3Q99618 AC116562.4-202ENST00000641738 218 ntBASIC20.83■□□□□ 0.93
CDCA3Q99618 TFP1-202ENST00000475455 1573 ntBASIC20.83■□□□□ 0.92
CDCA3Q99618 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.92
CDCA3Q99618 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.83■□□□□ 0.92
CDCA3Q99618 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA3Q99618 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CDCA3Q99618 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA3Q99618 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA3Q99618 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.82■□□□□ 0.92
CDCA3Q99618 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.82■□□□□ 0.92
CDCA3Q99618 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.82■□□□□ 0.92
CDCA3Q99618 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CDCA3Q99618 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.82■□□□□ 0.92
CDCA3Q99618 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCA3Q99618 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCA3Q99618 AC117947.1-201ENST00000427448 529 ntBASIC20.82■□□□□ 0.92
CDCA3Q99618 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.82■□□□□ 0.92
CDCA3Q99618 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.82■□□□□ 0.92
CDCA3Q99618 SLC25A1P4-201ENST00000567977 778 ntBASIC20.82■□□□□ 0.92
CDCA3Q99618 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.82■□□□□ 0.92
CDCA3Q99618 AL358472.4-201ENST00000633140 710 ntBASIC20.82■□□□□ 0.92
CDCA3Q99618 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 AL049796.1-201ENST00000565336 1766 ntBASIC20.82■□□□□ 0.92
CDCA3Q99618 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDCA3Q99618 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA3Q99618 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 AC233723.2-201ENST00000623798 2106 ntBASIC20.81■□□□□ 0.92
CDCA3Q99618 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCA3Q99618 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 RNF152P1-201ENST00000397754 604 ntBASIC20.81■□□□□ 0.92
CDCA3Q99618 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.81■□□□□ 0.92
CDCA3Q99618 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.81■□□□□ 0.92
CDCA3Q99618 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 CCR12P-201ENST00000446203 998 ntBASIC20.81■□□□□ 0.92
CDCA3Q99618 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA3Q99618 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.81■□□□□ 0.92
CDCA3Q99618 MYC-208ENST00000641036 567 ntBASIC20.81■□□□□ 0.92
CDCA3Q99618 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDCA3Q99618 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCA3Q99618 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDCA3Q99618 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDCA3Q99618 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms