Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TSPY6P-201ENST00000448518 926 ntBASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A4EQ96PG1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A4EQ96PG1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MS4A4EQ96PG1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
MS4A4EQ96PG1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 MIR4758-201ENST00000577688 71 ntBASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms