Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 AC073210.2-201ENST00000430369 194 ntBASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 TSPY6P-201ENST00000448518 926 ntBASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 PHGDH-210ENST00000641115 1638 ntBASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 AC007952.6-201ENST00000573168 2673 ntBASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 AC003957.1-201ENST00000625108 2673 ntBASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM5Q96HC4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 TREX1-205ENST00000625293 1783 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 RNF165-205ENST00000588679 2904 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 AC091874.3-201ENST00000512672 1195 ntBASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM5Q96HC4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 MIR4758-201ENST00000577688 71 ntBASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM5Q96HC4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms