Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 PCED1CP-201ENST00000419887 785 ntBASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 AC130371.2-201ENST00000619443 611 ntBASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 KRT8P20-201ENST00000423953 1409 ntBASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM43Q96BQ3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM43Q96BQ3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 AP006587.1-201ENST00000534129 1502 ntBASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM43Q96BQ3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 AP000692.2-201ENST00000608391 879 ntBASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM43Q96BQ3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AL450487.1-201ENST00000426799 995 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 FAM207BP-201ENST00000447172 505 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC092647.4-201ENST00000457211 535 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC008040.2-201ENST00000461049 708 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 COX11P1-201ENST00000489116 835 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC131212.4-201ENST00000623606 975 ntBASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM43Q96BQ3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 AC093458.2-201ENST00000623150 629 ntBASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 AC011558.1-201ENST00000623459 338 ntBASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 AL121956.5-201ENST00000625261 221 ntBASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 AC116562.4-202ENST00000641738 218 ntBASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRIM43Q96BQ3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 AC242852.2-201ENST00000615738 1807 ntBASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms