Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCG3Q8WXD2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.34■□□□□ 0.85
SCG3Q8WXD2 AC100791.3-201ENST00000617619 330 ntBASIC20.34■□□□□ 0.85
SCG3Q8WXD2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCG3Q8WXD2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 AIRN-201ENST00000601203 4374 ntBASIC20.33■□□□□ 0.85
SCG3Q8WXD2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 AC091874.3-201ENST00000512672 1195 ntBASIC20.33■□□□□ 0.85
SCG3Q8WXD2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCG3Q8WXD2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SCG3Q8WXD2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 KRT18P29-201ENST00000397031 1267 ntBASIC20.32■□□□□ 0.84
SCG3Q8WXD2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 PGM5P4-201ENST00000421970 445 ntBASIC20.32■□□□□ 0.84
SCG3Q8WXD2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.32■□□□□ 0.84
SCG3Q8WXD2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 MYC-209ENST00000641252 345 ntBASIC20.32■□□□□ 0.84
SCG3Q8WXD2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 AC092720.2-201ENST00000602388 1665 ntBASIC20.32■□□□□ 0.84
SCG3Q8WXD2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCG3Q8WXD2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms