Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC069152.1-201ENST00000438030 544 ntBASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 AC098934.4-201ENST00000564127 592 ntBASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH19Q8TAB3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH19Q8TAB3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
PCDH19Q8TAB3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 AC091874.3-201ENST00000512672 1195 ntBASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 KRT18P6-201ENST00000555540 1265 ntBASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH19Q8TAB3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH19Q8TAB3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 AC133041.1-202ENST00000642053 222 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms