Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 KRT8P36-201ENST00000489121 1440 ntBASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC33Q8N5R6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC33Q8N5R6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC33Q8N5R6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCDC33Q8N5R6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC33Q8N5R6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC33Q8N5R6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 RN7SL471P-201ENST00000580476 299 ntBASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 AL356652.1-201ENST00000615962 565 ntBASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 AC105020.6-201ENST00000621523 1217 ntBASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 AC087633.2-202ENST00000565166 1439 ntBASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC33Q8N5R6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 DPP3P2-201ENST00000416030 1696 ntBASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms