Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 HLA-G-203ENST00000376818 1127 ntBASIC24.72■■□□□ 1.55
SMC5Q8IY18 GPX1P1-201ENST00000388829 606 ntBASIC24.72■■□□□ 1.55
SMC5Q8IY18 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SMC5Q8IY18 AL137784.2-201ENST00000607332 1000 ntBASIC24.72■■□□□ 1.55
SMC5Q8IY18 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 AC026185.1-201ENST00000445748 174 ntBASIC24.71■■□□□ 1.55
SMC5Q8IY18 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMC5Q8IY18 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.71■■□□□ 1.55
SMC5Q8IY18 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
SMC5Q8IY18 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
SMC5Q8IY18 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
SMC5Q8IY18 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
SMC5Q8IY18 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SMC5Q8IY18 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SMC5Q8IY18 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 AF201337.1-201ENST00000520239 748 ntBASIC24.7■■□□□ 1.54
SMC5Q8IY18 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMC5Q8IY18 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SMC5Q8IY18 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMC5Q8IY18 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.7■■□□□ 1.54
SMC5Q8IY18 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 AC093484.2-201ENST00000580996 2166 ntBASIC24.69■■□□□ 1.54
SMC5Q8IY18 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 MIR663A-201ENST00000385250 93 ntBASIC24.69■■□□□ 1.54
SMC5Q8IY18 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 AC105036.2-201ENST00000569468 176 ntBASIC24.69■■□□□ 1.54
SMC5Q8IY18 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
SMC5Q8IY18 MKRN4P-201ENST00000444706 1521 ntBASIC24.69■■□□□ 1.54
SMC5Q8IY18 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SMC5Q8IY18 PHGDH-210ENST00000641115 1638 ntBASIC24.68■■□□□ 1.54
SMC5Q8IY18 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 LSM12P1-201ENST00000411836 588 ntBASIC24.68■■□□□ 1.54
SMC5Q8IY18 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SMC5Q8IY18 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC5Q8IY18 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.67■■□□□ 1.54
SMC5Q8IY18 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.67■■□□□ 1.54
SMC5Q8IY18 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.67■■□□□ 1.54
SMC5Q8IY18 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SMC5Q8IY18 AC005332.7-201ENST00000614046 2005 ntBASIC24.67■■□□□ 1.54
SMC5Q8IY18 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC5Q8IY18 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.67■■□□□ 1.54
SMC5Q8IY18 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms