Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 AC010980.2-201ENST00000587099 1412 ntBASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC00346Q8IVM7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 AC080038.1-201ENST00000611274 1154 ntBASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 OR10C1-204ENST00000622521 1039 ntBASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 AC007952.6-201ENST00000573168 2673 ntBASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 AC003957.1-201ENST00000625108 2673 ntBASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00346Q8IVM7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 KRT17P1-201ENST00000399211 1546 ntBASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00346Q8IVM7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms