Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 KRT18P68-201ENST00000392293 1000 ntBASIC24.34■■□□□ 1.49
CASC1Q6TDU7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 AC231657.2-201ENST00000624556 255 ntBASIC24.34■■□□□ 1.49
CASC1Q6TDU7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASC1Q6TDU7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 CYP2T1P-201ENST00000432607 1285 ntBASIC24.33■■□□□ 1.49
CASC1Q6TDU7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.33■■□□□ 1.49
CASC1Q6TDU7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
CASC1Q6TDU7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 KRT16P6-202ENST00000425692 1426 ntBASIC24.32■■□□□ 1.48
CASC1Q6TDU7 KRT8P17-201ENST00000453110 1448 ntBASIC24.32■■□□□ 1.48
CASC1Q6TDU7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.32■■□□□ 1.48
CASC1Q6TDU7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 AC007322.1-201ENST00000426983 750 ntBASIC24.31■■□□□ 1.48
CASC1Q6TDU7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 AC092666.2-201ENST00000613287 246 ntBASIC24.31■■□□□ 1.48
CASC1Q6TDU7 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 AC007952.6-201ENST00000573168 2673 ntBASIC24.31■■□□□ 1.48
CASC1Q6TDU7 AC003957.1-201ENST00000625108 2673 ntBASIC24.31■■□□□ 1.48
CASC1Q6TDU7 PTBP1P-201ENST00000554374 1601 ntBASIC24.31■■□□□ 1.48
CASC1Q6TDU7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CASC1Q6TDU7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 CYP2T3P-201ENST00000601990 817 ntBASIC24.3■■□□□ 1.48
CASC1Q6TDU7 AL031963.3-201ENST00000606441 850 ntBASIC24.3■■□□□ 1.48
CASC1Q6TDU7 AC080038.1-201ENST00000611274 1154 ntBASIC24.3■■□□□ 1.48
CASC1Q6TDU7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 AC125437.2-201ENST00000625180 2167 ntBASIC24.3■■□□□ 1.48
CASC1Q6TDU7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASC1Q6TDU7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 KRT8P20-201ENST00000423953 1409 ntBASIC24.29■■□□□ 1.48
CASC1Q6TDU7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.29■■□□□ 1.48
CASC1Q6TDU7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms