Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 RARRES2P4-201ENST00000514074 484 ntBASIC20.3■□□□□ 0.84
CASC4Q6P4E1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 AC011767.1-201ENST00000617410 1153 ntBASIC20.3■□□□□ 0.84
CASC4Q6P4E1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 AC120498.9-201ENST00000339021 3867 ntBASIC20.29■□□□□ 0.84
CASC4Q6P4E1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.29■□□□□ 0.84
CASC4Q6P4E1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 AC026271.2-201ENST00000428091 497 ntBASIC20.29■□□□□ 0.84
CASC4Q6P4E1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 DUX4L16-201ENST00000555130 1264 ntBASIC20.29■□□□□ 0.84
CASC4Q6P4E1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASC4Q6P4E1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 CNN2P6-201ENST00000439038 900 ntBASIC20.28■□□□□ 0.84
CASC4Q6P4E1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.28■□□□□ 0.84
CASC4Q6P4E1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASC4Q6P4E1 AC068338.2-201ENST00000563278 1430 ntBASIC20.27■□□□□ 0.84
CASC4Q6P4E1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 AL158211.5-201ENST00000623583 2518 ntBASIC20.27■□□□□ 0.84
CASC4Q6P4E1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 AC125437.2-201ENST00000625180 2167 ntBASIC20.27■□□□□ 0.84
CASC4Q6P4E1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.27■□□□□ 0.84
CASC4Q6P4E1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASC4Q6P4E1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CASC4Q6P4E1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms