Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 AL359075.1-203ENST00000462729 1002 ntBASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 AC130371.2-201ENST00000619443 611 ntBASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 AL031432.5-201ENST00000641059 760 ntBASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCRAQ6ISU1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 AC011484.1-201ENST00000377652 1995 ntBASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 AP006587.1-201ENST00000534129 1502 ntBASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 AC010653.2-201ENST00000623505 997 ntBASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 AC012313.10-201ENST00000623509 926 ntBASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCRAQ6ISU1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
PTCRAQ6ISU1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTCRAQ6ISU1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
PTCRAQ6ISU1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 SLC25A1P2-201ENST00000430693 912 ntBASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 AC007663.1-201ENST00000438948 1240 ntBASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PTCRAQ6ISU1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCRAQ6ISU1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCRAQ6ISU1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AC246785.2-201ENST00000432512 513 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms