Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL13A1Q5TAT6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 RPS8P6-201ENST00000426177 609 ntBASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 FOSL1P1-201ENST00000511041 816 ntBASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 SART3-203ENST00000546611 1184 ntBASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL13A1Q5TAT6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 TSPY17P-201ENST00000450329 467 ntBASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 PGAM5P1-201ENST00000518923 814 ntBASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL13A1Q5TAT6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL13A1Q5TAT6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL13A1Q5TAT6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL13A1Q5TAT6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC098831.1-202ENST00000438821 336 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC008040.2-201ENST00000461049 708 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC073648.2-201ENST00000510116 352 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 RNA5SP419-201ENST00000515908 135 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 TPSP2-201ENST00000561760 610 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC106730.1-201ENST00000566722 1090 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC112497.1-201ENST00000624824 639 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 AC092053.2-201ENST00000640557 1818 ntBASIC22.64■■□□□ 1.21
COL13A1Q5TAT6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 AC096733.2-201ENST00000609937 1394 ntBASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 AP001005.1-201ENST00000571755 1248 ntBASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.63■■□□□ 1.21
COL13A1Q5TAT6 AL139125.2-201ENST00000623134 1869 ntBASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 C1QL1P1-201ENST00000568105 661 ntBASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 AC011498.5-201ENST00000592027 486 ntBASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 AC131212.4-201ENST00000623606 975 ntBASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
COL13A1Q5TAT6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms