Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 SOX15-203ENST00000570788 1093 ntBASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 LINC01006-201ENST00000333319 2292 ntBASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRAP1Q5SW96 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AL512408.1-201ENST00000569378 2000 ntBASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 KRT16P6-202ENST00000425692 1426 ntBASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AC006557.6-201ENST00000623071 864 ntBASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 LINC01521-201ENST00000504184 1943 ntBASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 AL162377.1-201ENST00000618844 1793 ntBASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRAP1Q5SW96 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 UNC93B4-201ENST00000505679 747 ntBASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRAP1Q5SW96 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 AP003097.1-201ENST00000530657 1135 ntBASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms