Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 SMG8-203ENST00000578922 2178 ntBASIC23.37■■□□□ 1.33
SHROOM1Q2M3G4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 AC079598.2-202ENST00000546624 1451 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 RCN1P1-201ENST00000400413 996 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 MIR1224-201ENST00000408193 85 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 AL355355.2-201ENST00000442321 338 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 REXO1L10P-201ENST00000615707 1290 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 AC097493.4-201ENST00000641197 219 ntBASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHROOM1Q2M3G4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 AC073195.1-201ENST00000607241 877 ntBASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.35■■□□□ 1.33
SHROOM1Q2M3G4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 RBM17P1-201ENST00000453646 1190 ntBASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHROOM1Q2M3G4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 AP000525.1-201ENST00000608286 694 ntBASIC23.33■■□□□ 1.33
SHROOM1Q2M3G4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SHROOM1Q2M3G4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.33■■□□□ 1.32
SHROOM1Q2M3G4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHROOM1Q2M3G4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHROOM1Q2M3G4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 AL390955.1-201ENST00000428694 934 ntBASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 NUDT16P1-203ENST00000513809 620 ntBASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 AC010331.1-201ENST00000611423 582 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms