Protein–RNA interactions for Protein: Q07660

BRE4, Protein BRE4, yeastyeast

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE4Q07660 NUP188YML103C 4968 nt1.46□□□□□ -2.18
BRE4Q07660 PAU12YGR294W 363 nt1.46□□□□□ -2.18
BRE4Q07660 MSN5YDR335W 3675 nt1.45□□□□□ -2.18
BRE4Q07660 CDC25YLR310C 4770 nt1.45□□□□□ -2.18
BRE4Q07660 FYV8YGR196C 2454 nt1.45□□□□□ -2.18
BRE4Q07660 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
BRE4Q07660 NUP145YGL092W 3954 nt1.44□□□□□ -2.18
BRE4Q07660 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
BRE4Q07660 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
BRE4Q07660 PET111YMR257C 2403 nt1.42□□□□□ -2.18
BRE4Q07660 YJL077W-AYJL077W-A 87 nt1.42□□□□□ -2.18
BRE4Q07660 SIP4YJL089W 2490 nt1.42□□□□□ -2.18
BRE4Q07660 BUL2YML111W 2763 nt1.42□□□□□ -2.18
BRE4Q07660 MYO1YHR023W 5787 nt1.39□□□□□ -2.19
BRE4Q07660 tQ(UUG)QtQ(UUG)Q 76 nt1.38□□□□□ -2.19
BRE4Q07660 YLL006W-AYLL006W-A 177 nt1.37□□□□□ -2.19
BRE4Q07660 CLU1YMR012W 3834 nt1.37□□□□□ -2.19
BRE4Q07660 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
BRE4Q07660 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
BRE4Q07660 YNL054W-BYNL054W-B 5250 nt1.32□□□□□ -2.2
BRE4Q07660 YER090C-AYER090C-A 90 nt1.29□□□□□ -2.2
BRE4Q07660 CAT8YMR280C 4302 nt1.29□□□□□ -2.2
BRE4Q07660 NUP192YJL039C 5052 nt1.28□□□□□ -2.2
BRE4Q07660 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
BRE4Q07660 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
BRE4Q07660 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
BRE4Q07660 BUD3YCL014W 4911 nt1.18□□□□□ -2.22
BRE4Q07660 snR67snR67 82 nt1.16□□□□□ -2.22
BRE4Q07660 YOR192C-BYOR192C-B 5313 nt1.15□□□□□ -2.23
BRE4Q07660 YDL114W-AYDL114W-A 114 nt1.14□□□□□ -2.23
BRE4Q07660 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
BRE4Q07660 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
BRE4Q07660 RKR1YMR247C 4689 nt1.13□□□□□ -2.23
BRE4Q07660 YOR376W-AYOR376W-A 156 nt1.12□□□□□ -2.23
BRE4Q07660 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
BRE4Q07660 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
BRE4Q07660 SCC2YDR180W 4482 nt1.09□□□□□ -2.24
BRE4Q07660 tV(UAC)QtV(UAC)Q 76 nt1.08□□□□□ -2.24
BRE4Q07660 YKL106C-AYKL106C-A 120 nt1.08□□□□□ -2.24
BRE4Q07660 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
BRE4Q07660 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
BRE4Q07660 BEM2YER155C 6504 nt1.07□□□□□ -2.24
BRE4Q07660 YMR160WYMR160W 2451 nt1.03□□□□□ -2.24
BRE4Q07660 YPR117WYPR117W 7470 nt1□□□□□ -2.25
BRE4Q07660 IML1YJR138W 4755 nt0.99□□□□□ -2.25
BRE4Q07660 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
BRE4Q07660 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
BRE4Q07660 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
BRE4Q07660 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
BRE4Q07660 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
BRE4Q07660 tV(UAC)BtV(UAC)B 74 nt0.96□□□□□ -2.26
BRE4Q07660 tV(UAC)DtV(UAC)D 74 nt0.96□□□□□ -2.26
BRE4Q07660 snR40snR40 97 nt0.96□□□□□ -2.26
BRE4Q07660 PAU24YBR301W 363 nt0.92□□□□□ -2.26
BRE4Q07660 LTE1YAL024C 4308 nt0.91□□□□□ -2.26
BRE4Q07660 YBL100W-BYBL100W-B 5313 nt0.89□□□□□ -2.27
BRE4Q07660 MLP2YIL149C 5040 nt0.89□□□□□ -2.27
BRE4Q07660 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
BRE4Q07660 snR77snR77 88 nt0.79□□□□□ -2.28
BRE4Q07660 YOR316C-AYOR316C-A 210 nt0.77□□□□□ -2.29
BRE4Q07660 THO2YNL139C 4794 nt0.76□□□□□ -2.29
BRE4Q07660 YML100W-AYML100W-A 174 nt0.76□□□□□ -2.29
BRE4Q07660 SBH2YER019C-A 267 nt0.7□□□□□ -2.3
BRE4Q07660 MLP1YKR095W 5628 nt0.68□□□□□ -2.3
BRE4Q07660 YOR186C-AYOR186C-A 210 nt0.67□□□□□ -2.3
BRE4Q07660 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
BRE4Q07660 SOV1YMR066W 2697 nt0.63□□□□□ -2.31
BRE4Q07660 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
BRE4Q07660 IQG1YPL242C 4488 nt0.63□□□□□ -2.31
BRE4Q07660 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
BRE4Q07660 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
BRE4Q07660 UTP20YBL004W 7482 nt0.56□□□□□ -2.32
BRE4Q07660 ESP1YGR098C 4893 nt0.54□□□□□ -2.32
BRE4Q07660 PAU9YBL108C-A 129 nt0.52□□□□□ -2.33
BRE4Q07660 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
BRE4Q07660 tF(GAA)BtF(GAA)B 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)FtF(GAA)F 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)GtF(GAA)G 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)H1tF(GAA)H1 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)H2tF(GAA)H2 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)MtF(GAA)M 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)P1tF(GAA)P1 73 nt0.44□□□□□ -2.34
BRE4Q07660 tF(GAA)P2tF(GAA)P2 73 nt0.44□□□□□ -2.34
BRE4Q07660 snR128snR128 126 nt0.44□□□□□ -2.34
BRE4Q07660 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
BRE4Q07660 tA(UGC)QtA(UGC)Q 76 nt0.31□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms