Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 YOR170WYOR170W 306 nt-0.63□□□□□ -2.51
BER1Q06688 YPL152W-AYPL152W-A 99 nt-0.63□□□□□ -2.51
BER1Q06688 YDL007C-AYDL007C-A 258 nt-0.65□□□□□ -2.51
BER1Q06688 tM(CAU)Q2tM(CAU)Q2 78 nt-0.66□□□□□ -2.52
BER1Q06688 snR69snR69 101 nt-0.69□□□□□ -2.52
BER1Q06688 tQ(UUG)QtQ(UUG)Q 76 nt-0.69□□□□□ -2.52
BER1Q06688 YOR302WYOR302W 78 nt-0.7□□□□□ -2.52
BER1Q06688 tA(UGC)QtA(UGC)Q 76 nt-0.71□□□□□ -2.52
BER1Q06688 YNL067W-BYNL067W-B 141 nt-0.71□□□□□ -2.52
BER1Q06688 YGR146C-AYGR146C-A 162 nt-0.73□□□□□ -2.53
BER1Q06688 snR39BsnR39B 96 nt-0.74□□□□□ -2.53
BER1Q06688 YDR524W-CYDR524W-C 90 nt-0.75□□□□□ -2.53
BER1Q06688 PAU9YBL108C-A 129 nt-0.77□□□□□ -2.53
BER1Q06688 YOR329W-AYOR329W-A 210 nt-0.77□□□□□ -2.53
BER1Q06688 YGL188C-AYGL188C-A 141 nt-0.78□□□□□ -2.53
BER1Q06688 PMP2YEL017C-A 132 nt-0.79□□□□□ -2.54
BER1Q06688 YOR231C-AYOR231C-A 201 nt-0.79□□□□□ -2.54
BER1Q06688 YER090C-AYER090C-A 90 nt-0.8□□□□□ -2.54
BER1Q06688 YJL113WYJL113W 4647 nt-0.81□□□□□ -2.54
BER1Q06688 RDS3YPR094W 324 nt-0.81□□□□□ -2.54
BER1Q06688 YNL266WYNL266W 420 nt-0.86□□□□□ -2.55
BER1Q06688 snR50snR50 90 nt-0.86□□□□□ -2.55
BER1Q06688 YHL009W-BYHL009W-B 5409 nt-0.87□□□□□ -2.55
BER1Q06688 tT(UGU)G1tT(UGU)G1 72 nt-0.87□□□□□ -2.55
BER1Q06688 tT(UGU)G2tT(UGU)G2 72 nt-0.87□□□□□ -2.55
BER1Q06688 tT(UGU)PtT(UGU)P 72 nt-0.87□□□□□ -2.55
BER1Q06688 snR48snR48 113 nt-0.89□□□□□ -2.55
BER1Q06688 snR80snR80 171 nt-0.92□□□□□ -2.56
BER1Q06688 snR52snR52 92 nt-0.92□□□□□ -2.56
BER1Q06688 JLP2YMR132C 627 nt-0.93□□□□□ -2.56
BER1Q06688 snR33snR33 183 nt-0.94□□□□□ -2.56
BER1Q06688 tD(GUC)QtD(GUC)Q 75 nt-0.95□□□□□ -2.56
BER1Q06688 YLR342W-AYLR342W-A 174 nt-0.95□□□□□ -2.56
BER1Q06688 YNL205CYNL205C 423 nt-0.97□□□□□ -2.56
BER1Q06688 tL(UAA)QtL(UAA)Q 85 nt-0.99□□□□□ -2.57
BER1Q06688 YLR286W-AYLR286W-A 135 nt-1.02□□□□□ -2.57
BER1Q06688 YBR178WYBR178W 375 nt-1.03□□□□□ -2.57
BER1Q06688 snR67snR67 82 nt-1.06□□□□□ -2.58
BER1Q06688 YOR102WYOR102W 351 nt-1.06□□□□□ -2.58
BER1Q06688 YDL159C-BYDL159C-B 177 nt-1.08□□□□□ -2.58
BER1Q06688 YHL015W-AYHL015W-A 84 nt-1.08□□□□□ -2.58
BER1Q06688 snR161snR161 161 nt-1.09□□□□□ -2.58
BER1Q06688 SKI7YOR076C 2244 nt-1.15□□□□□ -2.59
BER1Q06688 YDR406W-AYDR406W-A 246 nt-1.18□□□□□ -2.6
BER1Q06688 YBR223W-AYBR223W-A 120 nt-1.19□□□□□ -2.6
BER1Q06688 YLR299C-AYLR299C-A 93 nt-1.24□□□□□ -2.61
BER1Q06688 YBR196C-AYBR196C-A 150 nt-1.25□□□□□ -2.61
BER1Q06688 YNL198CYNL198C 303 nt-1.27□□□□□ -2.61
BER1Q06688 Q0142Q0142 177 nt-1.29□□□□□ -2.62
BER1Q06688 YJL150WYJL150W 303 nt-1.32□□□□□ -2.62
BER1Q06688 YML054C-AYML054C-A 159 nt-1.38□□□□□ -2.63
BER1Q06688 YBL053WYBL053W 375 nt-1.38□□□□□ -2.63
BER1Q06688 YMR046W-AYMR046W-A 129 nt-1.42□□□□□ -2.64
BER1Q06688 SOM1YEL059C-A 225 nt-1.43□□□□□ -2.64
BER1Q06688 tP(UGG)QtP(UGG)Q 72 nt-1.44□□□□□ -2.64
BER1Q06688 YCR095W-AYCR095W-A 159 nt-1.51□□□□□ -2.65
BER1Q06688 YNR077CYNR077C 255 nt-1.53□□□□□ -2.65
BER1Q06688 YHR180C-BYHR180C-B 105 nt-1.54□□□□□ -2.66
BER1Q06688 SPG3YDR504C 384 nt-1.55□□□□□ -2.66
BER1Q06688 CDC65tQ(CUG)M 72 nt-1.64□□□□□ -2.67
BER1Q06688 YGR240C-AYGR240C-A 201 nt-1.64□□□□□ -2.67
BER1Q06688 YOR376W-AYOR376W-A 156 nt-1.64□□□□□ -2.67
BER1Q06688 snR77snR77 88 nt-1.66□□□□□ -2.68
BER1Q06688 tM(CAU)Q1tM(CAU)Q1 76 nt-1.66□□□□□ -2.68
BER1Q06688 YGR151CYGR151C 336 nt-1.78□□□□□ -2.69
BER1Q06688 YLR466C-BYLR466C-B 117 nt-1.8□□□□□ -2.7
BER1Q06688 tY(GUA)QtY(GUA)Q 84 nt-1.81□□□□□ -2.7
BER1Q06688 YKL106C-AYKL106C-A 120 nt-1.81□□□□□ -2.7
BER1Q06688 YOR316C-AYOR316C-A 210 nt-1.83□□□□□ -2.7
BER1Q06688 YBR109W-AYBR109W-A 225 nt-1.83□□□□□ -2.7
BER1Q06688 YBR296C-AYBR296C-A 120 nt-1.84□□□□□ -2.7
BER1Q06688 YOL083C-AYOL083C-A 141 nt-1.85□□□□□ -2.71
BER1Q06688 RPL41AYDL184C 78 nt-1.86□□□□□ -2.71
BER1Q06688 YCL001W-BYCL001W-B 255 nt-1.86□□□□□ -2.71
BER1Q06688 YMR315W-AYMR315W-A 108 nt-1.87□□□□□ -2.71
BER1Q06688 YBL071C-BYBL071C-B 99 nt-1.88□□□□□ -2.71
BER1Q06688 snR81snR81 201 nt-1.9□□□□□ -2.71
BER1Q06688 YNL338WYNL338W 159 nt-1.94□□□□□ -2.72
BER1Q06688 YOL164W-AYOL164W-A 183 nt-1.95□□□□□ -2.72
BER1Q06688 snR38snR38 95 nt-1.97□□□□□ -2.72
BER1Q06688 YAL037C-AYAL037C-A 93 nt-1.99□□□□□ -2.73
BER1Q06688 snR47snR47 99 nt-2.08□□□□□ -2.74
BER1Q06688 YBL100W-CYBL100W-C 120 nt-2.12□□□□□ -2.75
BER1Q06688 YNL337WYNL337W 255 nt-2.16□□□□□ -2.76
BER1Q06688 YBR126W-BYBR126W-B 144 nt-2.21□□□□□ -2.76
BER1Q06688 Q0032Q0032 291 nt-2.27□□□□□ -2.77
BER1Q06688 YOR309CYOR309C 381 nt-2.27□□□□□ -2.77
BER1Q06688 YGL007C-AYGL007C-A 87 nt-2.36□□□□□ -2.79
BER1Q06688 tS(GCU)Q1tS(GCU)Q1 86 nt-2.36□□□□□ -2.79
BER1Q06688 YKL225WYKL225W 348 nt-2.36□□□□□ -2.79
BER1Q06688 snR6snR6 112 nt-2.44□□□□□ -2.8
BER1Q06688 YGL041C-BYGL041C-B 183 nt-2.45□□□□□ -2.8
BER1Q06688 YNL103W-AYNL103W-A 90 nt-2.5□□□□□ -2.81
BER1Q06688 snR61snR61 90 nt-2.52□□□□□ -2.81
BER1Q06688 YDL114W-AYDL114W-A 114 nt-2.57□□□□□ -2.82
BER1Q06688 tV(UAC)QtV(UAC)Q 76 nt-2.57□□□□□ -2.82
BER1Q06688 YOR335W-AYOR335W-A 81 nt-2.58□□□□□ -2.82
BER1Q06688 YDR034C-AYDR034C-A 177 nt-2.6□□□□□ -2.83
BER1Q06688 RPL41BYDL133C-A 78 nt-2.63□□□□□ -2.83
BER1Q06688 snR73snR73 106 nt-2.66□□□□□ -2.84
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms