Protein–RNA interactions for Protein: Q05789

ATG38, Autophagy-related protein 38, yeastyeast

Known RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG38Q05789 YOR293C-AYOR293C-A 150 nt-2.3□□□□□ -2.78
ATG38Q05789 YOR381W-AYOR381W-A 168 nt-2.31□□□□□ -2.78
ATG38Q05789 snR77snR77 88 nt-2.32□□□□□ -2.78
ATG38Q05789 YML054C-AYML054C-A 159 nt-2.35□□□□□ -2.79
ATG38Q05789 YBR182C-AYBR182C-A 195 nt-2.36□□□□□ -2.79
ATG38Q05789 YMR315W-AYMR315W-A 108 nt-2.37□□□□□ -2.79
ATG38Q05789 YBR126W-BYBR126W-B 144 nt-2.4□□□□□ -2.79
ATG38Q05789 YAL016C-BYAL016C-B 186 nt-2.41□□□□□ -2.8
ATG38Q05789 YOR008C-AYOR008C-A 225 nt-2.41□□□□□ -2.8
ATG38Q05789 YJR157WYJR157W 363 nt-2.43□□□□□ -2.8
ATG38Q05789 tD(GUC)QtD(GUC)Q 75 nt-2.45□□□□□ -2.8
ATG38Q05789 YFL019CYFL019C 354 nt-2.45□□□□□ -2.8
ATG38Q05789 YEL014CYEL014C 306 nt-2.47□□□□□ -2.8
ATG38Q05789 YLR286W-AYLR286W-A 135 nt-2.48□□□□□ -2.81
ATG38Q05789 YPL038W-AYPL038W-A 192 nt-2.49□□□□□ -2.81
ATG38Q05789 YPR197CYPR197C 564 nt-2.54□□□□□ -2.82
ATG38Q05789 YER181CYER181C 324 nt-2.56□□□□□ -2.82
ATG38Q05789 tF(GAA)QtF(GAA)Q 75 nt-2.59□□□□□ -2.82
ATG38Q05789 YOR329W-AYOR329W-A 210 nt-2.6□□□□□ -2.83
ATG38Q05789 YDL159C-BYDL159C-B 177 nt-2.61□□□□□ -2.83
ATG38Q05789 YDR413CYDR413C 576 nt-2.62□□□□□ -2.83
ATG38Q05789 RPL39YJL189W 156 nt-2.62□□□□□ -2.83
ATG38Q05789 YBR178WYBR178W 375 nt-2.65□□□□□ -2.83
ATG38Q05789 YBR131C-AYBR131C-A 90 nt-2.67□□□□□ -2.84
ATG38Q05789 YDR157WYDR157W 402 nt-2.73□□□□□ -2.85
ATG38Q05789 YOR309CYOR309C 381 nt-2.74□□□□□ -2.85
ATG38Q05789 YDR543CYDR543C 300 nt-2.81□□□□□ -2.86
ATG38Q05789 YNL277W-AYNL277W-A 189 nt-2.82□□□□□ -2.86
ATG38Q05789 Q0017Q0017 162 nt-2.83□□□□□ -2.86
ATG38Q05789 snR55snR55 98 nt-2.84□□□□□ -2.86
ATG38Q05789 YOR376W-AYOR376W-A 156 nt-2.84□□□□□ -2.86
ATG38Q05789 YDL240C-AYDL240C-A 138 nt-2.86□□□□□ -2.87
ATG38Q05789 YNL097C-BYNL097C-B 123 nt-2.87□□□□□ -2.87
ATG38Q05789 snR48snR48 113 nt-2.88□□□□□ -2.87
ATG38Q05789 YKL118WYKL118W 312 nt-2.91□□□□□ -2.88
ATG38Q05789 YLR299C-AYLR299C-A 93 nt-2.92□□□□□ -2.88
ATG38Q05789 YBR196C-AYBR196C-A 150 nt-2.92□□□□□ -2.88
ATG38Q05789 YOR102WYOR102W 351 nt-2.93□□□□□ -2.88
ATG38Q05789 YLR222C-AYLR222C-A 231 nt-2.95□□□□□ -2.88
ATG38Q05789 YOL166W-AYOL166W-A 156 nt-2.98□□□□□ -2.89
ATG38Q05789 GIM4YEL003W 336 nt-3.02□□□□□ -2.89
ATG38Q05789 YGL188C-AYGL188C-A 141 nt-3.03□□□□□ -2.89
ATG38Q05789 YLR342W-AYLR342W-A 174 nt-3.05□□□□□ -2.9
ATG38Q05789 YDR118W-AYDR118W-A 117 nt-3.06□□□□□ -2.9
ATG38Q05789 YDR524W-CYDR524W-C 90 nt-3.07□□□□□ -2.9
ATG38Q05789 tL(UAA)QtL(UAA)Q 85 nt-3.1□□□□□ -2.91
ATG38Q05789 YOL155W-AYOL155W-A 135 nt-3.12□□□□□ -2.91
ATG38Q05789 YOR316C-AYOR316C-A 210 nt-3.12□□□□□ -2.91
ATG38Q05789 Q0142Q0142 177 nt-3.17□□□□□ -2.92
ATG38Q05789 YHR180C-BYHR180C-B 105 nt-3.17□□□□□ -2.92
ATG38Q05789 YOL083C-AYOL083C-A 141 nt-3.19□□□□□ -2.92
ATG38Q05789 YOR302WYOR302W 78 nt-3.22□□□□□ -2.92
ATG38Q05789 YKL106C-AYKL106C-A 120 nt-3.24□□□□□ -2.93
ATG38Q05789 YPR012WYPR012W 255 nt-3.24□□□□□ -2.93
ATG38Q05789 YHL015W-AYHL015W-A 84 nt-3.3□□□□□ -2.94
ATG38Q05789 VAR1Q0140 1197 nt-3.31□□□□□ -2.94
ATG38Q05789 snR52snR52 92 nt-3.34□□□□□ -2.94
ATG38Q05789 YPL152W-AYPL152W-A 99 nt-3.38□□□□□ -2.95
ATG38Q05789 snR65snR65 100 nt-3.44□□□□□ -2.96
ATG38Q05789 snR6snR6 112 nt-3.48□□□□□ -2.97
ATG38Q05789 YJL150WYJL150W 303 nt-3.51□□□□□ -2.97
ATG38Q05789 YNL198CYNL198C 303 nt-3.52□□□□□ -2.97
ATG38Q05789 YBR109W-AYBR109W-A 225 nt-3.59□□□□□ -2.98
ATG38Q05789 snR80snR80 171 nt-3.6□□□□□ -2.99
ATG38Q05789 YOR335W-AYOR335W-A 81 nt-3.6□□□□□ -2.99
ATG38Q05789 snR73snR73 106 nt-3.61□□□□□ -2.99
ATG38Q05789 snR56snR56 88 nt-3.68□□□□□ -3
ATG38Q05789 RPL41BYDL133C-A 78 nt-3.69□□□□□ -3
ATG38Q05789 YBR296C-AYBR296C-A 120 nt-3.73□□□□□ -3.01
ATG38Q05789 SOM1YEL059C-A 225 nt-3.74□□□□□ -3.01
ATG38Q05789 RPL41AYDL184C 78 nt-3.75□□□□□ -3.01
ATG38Q05789 YDR524C-AYDR524C-A 120 nt-3.83□□□□□ -3.02
ATG38Q05789 YCR095W-AYCR095W-A 159 nt-3.89□□□□□ -3.03
ATG38Q05789 snR38snR38 95 nt-3.9□□□□□ -3.03
ATG38Q05789 YDR406W-AYDR406W-A 246 nt-3.98□□□□□ -3.05
ATG38Q05789 YJR162CYJR162C 351 nt-4□□□□□ -3.05
ATG38Q05789 YNL337WYNL337W 255 nt-4□□□□□ -3.05
ATG38Q05789 YOR231C-AYOR231C-A 201 nt-4.04□□□□□ -3.06
ATG38Q05789 YHR175W-AYHR175W-A 150 nt-4.13□□□□□ -3.07
ATG38Q05789 YBL053WYBL053W 375 nt-4.13□□□□□ -3.07
ATG38Q05789 YGR151CYGR151C 336 nt-4.22□□□□□ -3.08
ATG38Q05789 YBL071C-BYBL071C-B 99 nt-4.25□□□□□ -3.09
ATG38Q05789 snR85snR85 171 nt-4.27□□□□□ -3.09
ATG38Q05789 YOL164W-AYOL164W-A 183 nt-4.28□□□□□ -3.09
ATG38Q05789 YDL114W-AYDL114W-A 114 nt-4.31□□□□□ -3.1
ATG38Q05789 snR47snR47 99 nt-4.31□□□□□ -3.1
ATG38Q05789 tR(ACG)Q2tR(ACG)Q2 74 nt-4.32□□□□□ -3.1
ATG38Q05789 Q0144Q0144 330 nt-4.34□□□□□ -3.1
ATG38Q05789 tV(UAC)QtV(UAC)Q 76 nt-4.34□□□□□ -3.1
ATG38Q05789 snR87snR87 109 nt-4.43□□□□□ -3.12
ATG38Q05789 YAL037C-AYAL037C-A 93 nt-4.46□□□□□ -3.12
ATG38Q05789 YBL100W-CYBL100W-C 120 nt-4.48□□□□□ -3.13
ATG38Q05789 SPG3YDR504C 384 nt-4.58□□□□□ -3.14
ATG38Q05789 YKL225WYKL225W 348 nt-4.6□□□□□ -3.15
ATG38Q05789 YMR046W-AYMR046W-A 129 nt-4.66□□□□□ -3.16
ATG38Q05789 tS(GCU)Q1tS(GCU)Q1 86 nt-4.7□□□□□ -3.16
ATG38Q05789 YCL001W-BYCL001W-B 255 nt-4.76□□□□□ -3.17
ATG38Q05789 YKL096C-BYKL096C-B 150 nt-4.82□□□□□ -3.18
ATG38Q05789 snR58snR58 96 nt-4.95□□□□□ -3.2
ATG38Q05789 YGR122C-AYGR122C-A 129 nt-4.96□□□□□ -3.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms