Protein–RNA interactions for Protein: Q05776

UPS1, Protein UPS1, mitochondrial, yeastyeast

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPS1Q05776 YDR413CYDR413C 576 nt-0.92□□□□□ -2.56
UPS1Q05776 YOR008C-AYOR008C-A 225 nt-0.92□□□□□ -2.56
UPS1Q05776 snR161snR161 161 nt-0.92□□□□□ -2.56
UPS1Q05776 tF(GAA)QtF(GAA)Q 75 nt-0.93□□□□□ -2.56
UPS1Q05776 snR39BsnR39B 96 nt-0.93□□□□□ -2.56
UPS1Q05776 tP(UGG)QtP(UGG)Q 72 nt-0.94□□□□□ -2.56
UPS1Q05776 YDR118W-AYDR118W-A 117 nt-0.96□□□□□ -2.56
UPS1Q05776 YOR329W-AYOR329W-A 210 nt-0.96□□□□□ -2.56
UPS1Q05776 YGR146C-AYGR146C-A 162 nt-0.97□□□□□ -2.56
UPS1Q05776 YNL277W-AYNL277W-A 189 nt-0.98□□□□□ -2.57
UPS1Q05776 SKI7YOR076C 2244 nt-0.99□□□□□ -2.57
UPS1Q05776 YDL240C-AYDL240C-A 138 nt-1□□□□□ -2.57
UPS1Q05776 snR67snR67 82 nt-1.01□□□□□ -2.57
UPS1Q05776 tD(GUC)QtD(GUC)Q 75 nt-1.01□□□□□ -2.57
UPS1Q05776 YER181CYER181C 324 nt-1.01□□□□□ -2.57
UPS1Q05776 VAR1Q0140 1197 nt-1.01□□□□□ -2.57
UPS1Q05776 YBR178WYBR178W 375 nt-1.01□□□□□ -2.57
UPS1Q05776 RPL39YJL189W 156 nt-1.02□□□□□ -2.57
UPS1Q05776 YKL118WYKL118W 312 nt-1.02□□□□□ -2.57
UPS1Q05776 YLR286W-AYLR286W-A 135 nt-1.03□□□□□ -2.57
UPS1Q05776 snR55snR55 98 nt-1.05□□□□□ -2.58
UPS1Q05776 YNL097C-BYNL097C-B 123 nt-1.06□□□□□ -2.58
UPS1Q05776 YDL159C-BYDL159C-B 177 nt-1.08□□□□□ -2.58
UPS1Q05776 YBR223W-AYBR223W-A 120 nt-1.1□□□□□ -2.59
UPS1Q05776 YNR077CYNR077C 255 nt-1.12□□□□□ -2.59
UPS1Q05776 YOR302WYOR302W 78 nt-1.12□□□□□ -2.59
UPS1Q05776 GIM4YEL003W 336 nt-1.14□□□□□ -2.59
UPS1Q05776 YNL205CYNL205C 423 nt-1.15□□□□□ -2.59
UPS1Q05776 YPR012WYPR012W 255 nt-1.15□□□□□ -2.59
UPS1Q05776 YML054C-AYML054C-A 159 nt-1.16□□□□□ -2.6
UPS1Q05776 YOL155W-AYOL155W-A 135 nt-1.16□□□□□ -2.6
UPS1Q05776 tL(UAA)QtL(UAA)Q 85 nt-1.18□□□□□ -2.6
UPS1Q05776 YGL188C-AYGL188C-A 141 nt-1.2□□□□□ -2.6
UPS1Q05776 snR52snR52 92 nt-1.2□□□□□ -2.6
UPS1Q05776 snR48snR48 113 nt-1.21□□□□□ -2.6
UPS1Q05776 snR77snR77 88 nt-1.22□□□□□ -2.6
UPS1Q05776 CDC65tQ(CUG)M 72 nt-1.22□□□□□ -2.6
UPS1Q05776 YPL152W-AYPL152W-A 99 nt-1.23□□□□□ -2.61
UPS1Q05776 YLR299C-AYLR299C-A 93 nt-1.24□□□□□ -2.61
UPS1Q05776 YOR102WYOR102W 351 nt-1.24□□□□□ -2.61
UPS1Q05776 Q0144Q0144 330 nt-1.29□□□□□ -2.62
UPS1Q05776 YGR240C-AYGR240C-A 201 nt-1.29□□□□□ -2.62
UPS1Q05776 YBR196C-AYBR196C-A 150 nt-1.29□□□□□ -2.62
UPS1Q05776 snR65snR65 100 nt-1.3□□□□□ -2.62
UPS1Q05776 tY(GUA)QtY(GUA)Q 84 nt-1.3□□□□□ -2.62
UPS1Q05776 YLR342W-AYLR342W-A 174 nt-1.3□□□□□ -2.62
UPS1Q05776 YHL015W-AYHL015W-A 84 nt-1.31□□□□□ -2.62
UPS1Q05776 YMR315W-AYMR315W-A 108 nt-1.34□□□□□ -2.62
UPS1Q05776 YOR376W-AYOR376W-A 156 nt-1.34□□□□□ -2.62
UPS1Q05776 snR80snR80 171 nt-1.35□□□□□ -2.63
UPS1Q05776 snR81snR81 201 nt-1.36□□□□□ -2.63
UPS1Q05776 YHR175W-AYHR175W-A 150 nt-1.4□□□□□ -2.63
UPS1Q05776 YHR180C-BYHR180C-B 105 nt-1.42□□□□□ -2.64
UPS1Q05776 YNL198CYNL198C 303 nt-1.43□□□□□ -2.64
UPS1Q05776 YBL053WYBL053W 375 nt-1.46□□□□□ -2.64
UPS1Q05776 YOR231C-AYOR231C-A 201 nt-1.47□□□□□ -2.64
UPS1Q05776 tR(ACG)Q2tR(ACG)Q2 74 nt-1.48□□□□□ -2.65
UPS1Q05776 YJL150WYJL150W 303 nt-1.49□□□□□ -2.65
UPS1Q05776 snR56snR56 88 nt-1.53□□□□□ -2.65
UPS1Q05776 SOM1YEL059C-A 225 nt-1.54□□□□□ -2.66
UPS1Q05776 YKL106C-AYKL106C-A 120 nt-1.54□□□□□ -2.66
UPS1Q05776 YOR316C-AYOR316C-A 210 nt-1.55□□□□□ -2.66
UPS1Q05776 YDR406W-AYDR406W-A 246 nt-1.57□□□□□ -2.66
UPS1Q05776 YOR309CYOR309C 381 nt-1.58□□□□□ -2.66
UPS1Q05776 YBR109W-AYBR109W-A 225 nt-1.63□□□□□ -2.67
UPS1Q05776 YDR524W-CYDR524W-C 90 nt-1.67□□□□□ -2.68
UPS1Q05776 RPL41AYDL184C 78 nt-1.68□□□□□ -2.68
UPS1Q05776 YBR296C-AYBR296C-A 120 nt-1.68□□□□□ -2.68
UPS1Q05776 YCR095W-AYCR095W-A 159 nt-1.69□□□□□ -2.68
UPS1Q05776 snR38snR38 95 nt-1.7□□□□□ -2.68
UPS1Q05776 YOL083C-AYOL083C-A 141 nt-1.71□□□□□ -2.68
UPS1Q05776 YGR151CYGR151C 336 nt-1.73□□□□□ -2.69
UPS1Q05776 YBL071C-BYBL071C-B 99 nt-1.75□□□□□ -2.69
UPS1Q05776 YOL164W-AYOL164W-A 183 nt-1.81□□□□□ -2.7
UPS1Q05776 snR6snR6 112 nt-1.85□□□□□ -2.71
UPS1Q05776 snR47snR47 99 nt-1.85□□□□□ -2.71
UPS1Q05776 YBR126W-BYBR126W-B 144 nt-1.88□□□□□ -2.71
UPS1Q05776 YCL001W-BYCL001W-B 255 nt-1.91□□□□□ -2.72
UPS1Q05776 YOR335W-AYOR335W-A 81 nt-1.92□□□□□ -2.72
UPS1Q05776 SPG3YDR504C 384 nt-1.93□□□□□ -2.72
UPS1Q05776 YMR046W-AYMR046W-A 129 nt-1.94□□□□□ -2.72
UPS1Q05776 YAL037C-AYAL037C-A 93 nt-1.95□□□□□ -2.72
UPS1Q05776 snR73snR73 106 nt-1.97□□□□□ -2.72
UPS1Q05776 YBL100W-CYBL100W-C 120 nt-2.01□□□□□ -2.73
UPS1Q05776 tS(GCU)Q1tS(GCU)Q1 86 nt-2.02□□□□□ -2.73
UPS1Q05776 RPL41BYDL133C-A 78 nt-2.04□□□□□ -2.74
UPS1Q05776 YKL225WYKL225W 348 nt-2.07□□□□□ -2.74
UPS1Q05776 YLR466C-BYLR466C-B 117 nt-2.08□□□□□ -2.74
UPS1Q05776 YNL338WYNL338W 159 nt-2.1□□□□□ -2.75
UPS1Q05776 YDL114W-AYDL114W-A 114 nt-2.11□□□□□ -2.75
UPS1Q05776 tV(UAC)QtV(UAC)Q 76 nt-2.12□□□□□ -2.75
UPS1Q05776 YNL337WYNL337W 255 nt-2.14□□□□□ -2.75
UPS1Q05776 tM(CAU)Q1tM(CAU)Q1 76 nt-2.19□□□□□ -2.76
UPS1Q05776 snR85snR85 171 nt-2.2□□□□□ -2.76
UPS1Q05776 YDL159W-AYDL159W-A 132 nt-2.29□□□□□ -2.78
UPS1Q05776 YDR034C-AYDR034C-A 177 nt-2.31□□□□□ -2.78
UPS1Q05776 YGL041C-BYGL041C-B 183 nt-2.31□□□□□ -2.78
UPS1Q05776 Q0142Q0142 177 nt-2.32□□□□□ -2.78
UPS1Q05776 YGR122C-AYGR122C-A 129 nt-2.35□□□□□ -2.79
UPS1Q05776 YNL103W-AYNL103W-A 90 nt-2.36□□□□□ -2.79
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms