Protein–RNA interactions for Protein: Q00711

SDH1, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, yeastyeast

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDH1Q00711 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
SDH1Q00711 SKI7YOR076C 2244 nt1.46□□□□□ -2.18
SDH1Q00711 snR38snR38 95 nt1.46□□□□□ -2.18
SDH1Q00711 HUG1YML058W-A 207 nt1.45□□□□□ -2.18
SDH1Q00711 AI1Q0050 2505 nt1.45□□□□□ -2.18
SDH1Q00711 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
SDH1Q00711 YJL077W-AYJL077W-A 87 nt1.42□□□□□ -2.18
SDH1Q00711 SSK2YNR031C 4740 nt1.41□□□□□ -2.18
SDH1Q00711 NIP1YMR309C 2439 nt1.41□□□□□ -2.18
SDH1Q00711 SIP4YJL089W 2490 nt1.39□□□□□ -2.19
SDH1Q00711 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
SDH1Q00711 YGR122C-AYGR122C-A 129 nt1.37□□□□□ -2.19
SDH1Q00711 BUL2YML111W 2763 nt1.37□□□□□ -2.19
SDH1Q00711 SPC110YDR356W 2835 nt1.37□□□□□ -2.19
SDH1Q00711 PAU12YGR294W 363 nt1.36□□□□□ -2.19
SDH1Q00711 YLL006W-AYLL006W-A 177 nt1.35□□□□□ -2.19
SDH1Q00711 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
SDH1Q00711 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
SDH1Q00711 HKR1YDR420W 5409 nt1.32□□□□□ -2.2
SDH1Q00711 tQ(UUG)QtQ(UUG)Q 76 nt1.31□□□□□ -2.2
SDH1Q00711 YGR130CYGR130C 2451 nt1.26□□□□□ -2.21
SDH1Q00711 BUD3YCL014W 4911 nt1.24□□□□□ -2.21
SDH1Q00711 YER090C-AYER090C-A 90 nt1.23□□□□□ -2.21
SDH1Q00711 tH(GUG)E1tH(GUG)E1 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)E2tH(GUG)E2 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)G1tH(GUG)G1 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)G2tH(GUG)G2 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)HtH(GUG)H 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)KtH(GUG)K 72 nt1.21□□□□□ -2.22
SDH1Q00711 tH(GUG)MtH(GUG)M 72 nt1.21□□□□□ -2.22
SDH1Q00711 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
SDH1Q00711 PET111YMR257C 2403 nt1.16□□□□□ -2.22
SDH1Q00711 MLP2YIL149C 5040 nt1.16□□□□□ -2.22
SDH1Q00711 SCC2YDR180W 4482 nt1.15□□□□□ -2.22
SDH1Q00711 BEM2YER155C 6504 nt1.15□□□□□ -2.23
SDH1Q00711 IML1YJR138W 4755 nt1.13□□□□□ -2.23
SDH1Q00711 YNL054W-BYNL054W-B 5250 nt1.11□□□□□ -2.23
SDH1Q00711 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
SDH1Q00711 YPR117WYPR117W 7470 nt1.09□□□□□ -2.24
SDH1Q00711 snR67snR67 82 nt1.08□□□□□ -2.24
SDH1Q00711 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SDH1Q00711 tV(UAC)BtV(UAC)B 74 nt1.05□□□□□ -2.24
SDH1Q00711 tV(UAC)DtV(UAC)D 74 nt1.05□□□□□ -2.24
SDH1Q00711 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
SDH1Q00711 YOR192C-BYOR192C-B 5313 nt1.04□□□□□ -2.24
SDH1Q00711 PAU24YBR301W 363 nt1.03□□□□□ -2.24
SDH1Q00711 LTE1YAL024C 4308 nt1.02□□□□□ -2.25
SDH1Q00711 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
SDH1Q00711 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
SDH1Q00711 YDL114W-AYDL114W-A 114 nt0.97□□□□□ -2.25
SDH1Q00711 YKL106C-AYKL106C-A 120 nt0.95□□□□□ -2.26
SDH1Q00711 YMR160WYMR160W 2451 nt0.92□□□□□ -2.26
SDH1Q00711 tV(UAC)QtV(UAC)Q 76 nt0.91□□□□□ -2.26
SDH1Q00711 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
SDH1Q00711 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
SDH1Q00711 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
SDH1Q00711 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
SDH1Q00711 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
SDH1Q00711 YBL100W-BYBL100W-B 5313 nt0.9□□□□□ -2.27
SDH1Q00711 tF(GAA)BtF(GAA)B 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)FtF(GAA)F 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)GtF(GAA)G 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)H1tF(GAA)H1 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)H2tF(GAA)H2 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)MtF(GAA)M 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)P1tF(GAA)P1 73 nt0.88□□□□□ -2.27
SDH1Q00711 tF(GAA)P2tF(GAA)P2 73 nt0.88□□□□□ -2.27
SDH1Q00711 YOR376W-AYOR376W-A 156 nt0.86□□□□□ -2.27
SDH1Q00711 MLP1YKR095W 5628 nt0.86□□□□□ -2.27
SDH1Q00711 MYO1YHR023W 5787 nt0.8□□□□□ -2.28
SDH1Q00711 IQG1YPL242C 4488 nt0.79□□□□□ -2.28
SDH1Q00711 YOL014WYOL014W 375 nt0.74□□□□□ -2.29
SDH1Q00711 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
SDH1Q00711 YML100W-AYML100W-A 174 nt0.72□□□□□ -2.29
SDH1Q00711 YOR186C-AYOR186C-A 210 nt0.72□□□□□ -2.29
SDH1Q00711 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
SDH1Q00711 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
SDH1Q00711 snR40snR40 97 nt0.69□□□□□ -2.3
SDH1Q00711 YKL145W-AYKL145W-A 93 nt0.68□□□□□ -2.3
SDH1Q00711 YOR316C-AYOR316C-A 210 nt0.68□□□□□ -2.3
SDH1Q00711 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
SDH1Q00711 snR77snR77 88 nt0.64□□□□□ -2.31
SDH1Q00711 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SDH1Q00711 SBH2YER019C-A 267 nt0.6□□□□□ -2.31
SDH1Q00711 ESP1YGR098C 4893 nt0.6□□□□□ -2.31
SDH1Q00711 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
SDH1Q00711 SOV1YMR066W 2697 nt0.53□□□□□ -2.32
SDH1Q00711 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
SDH1Q00711 PAU9YBL108C-A 129 nt0.44□□□□□ -2.34
SDH1Q00711 snR128snR128 126 nt0.43□□□□□ -2.34
SDH1Q00711 YJL113WYJL113W 4647 nt0.41□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms