Protein–RNA interactions for Protein: Q00362

CDC55, Protein phosphatase PP2A regulatory subunit B, yeastyeast

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC55Q00362 ORC3YLL004W 1851 nt1.24□□□□□ -2.21
CDC55Q00362 IML1YJR138W 4755 nt1.21□□□□□ -2.22
CDC55Q00362 NIP1YMR309C 2439 nt1.21□□□□□ -2.22
CDC55Q00362 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
CDC55Q00362 SIP4YJL089W 2490 nt1.18□□□□□ -2.22
CDC55Q00362 BUL2YML111W 2763 nt1.18□□□□□ -2.22
CDC55Q00362 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
CDC55Q00362 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
CDC55Q00362 RDS3YPR094W 324 nt1.16□□□□□ -2.22
CDC55Q00362 YNL054W-BYNL054W-B 5250 nt1.16□□□□□ -2.22
CDC55Q00362 YPR117WYPR117W 7470 nt1.15□□□□□ -2.23
CDC55Q00362 YJL077W-AYJL077W-A 87 nt1.15□□□□□ -2.23
CDC55Q00362 snR47snR47 99 nt1.15□□□□□ -2.23
CDC55Q00362 YLR299C-AYLR299C-A 93 nt1.14□□□□□ -2.23
CDC55Q00362 YDL159C-BYDL159C-B 177 nt1.13□□□□□ -2.23
CDC55Q00362 YOR192C-BYOR192C-B 5313 nt1.12□□□□□ -2.23
CDC55Q00362 BUD3YCL014W 4911 nt1.09□□□□□ -2.23
CDC55Q00362 PAU12YGR294W 363 nt1.08□□□□□ -2.24
CDC55Q00362 snR53snR53 91 nt1.08□□□□□ -2.24
CDC55Q00362 LTE1YAL024C 4308 nt1.06□□□□□ -2.24
CDC55Q00362 PET111YMR257C 2403 nt1.06□□□□□ -2.24
CDC55Q00362 MYO1YHR023W 5787 nt1.06□□□□□ -2.24
CDC55Q00362 BEM2YER155C 6504 nt1.05□□□□□ -2.24
CDC55Q00362 YDR371C-AYDR371C-A 105 nt1.04□□□□□ -2.24
CDC55Q00362 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
CDC55Q00362 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
CDC55Q00362 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
CDC55Q00362 snR64snR64 101 nt1.03□□□□□ -2.24
CDC55Q00362 tQ(UUG)QtQ(UUG)Q 76 nt1.03□□□□□ -2.24
CDC55Q00362 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
CDC55Q00362 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
CDC55Q00362 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
CDC55Q00362 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
CDC55Q00362 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
CDC55Q00362 YML054C-AYML054C-A 159 nt0.99□□□□□ -2.25
CDC55Q00362 PAU24YBR301W 363 nt0.99□□□□□ -2.25
CDC55Q00362 YBR109W-AYBR109W-A 225 nt0.98□□□□□ -2.25
CDC55Q00362 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
CDC55Q00362 YKL225WYKL225W 348 nt0.96□□□□□ -2.26
CDC55Q00362 snR38snR38 95 nt0.95□□□□□ -2.26
CDC55Q00362 YHR180C-BYHR180C-B 105 nt0.93□□□□□ -2.26
CDC55Q00362 AI1Q0050 2505 nt0.91□□□□□ -2.26
CDC55Q00362 YER090C-AYER090C-A 90 nt0.88□□□□□ -2.27
CDC55Q00362 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
CDC55Q00362 RPL41AYDL184C 78 nt0.87□□□□□ -2.27
CDC55Q00362 YBR296C-AYBR296C-A 120 nt0.87□□□□□ -2.27
CDC55Q00362 YBL100W-BYBL100W-B 5313 nt0.86□□□□□ -2.27
CDC55Q00362 snR50snR50 90 nt0.84□□□□□ -2.27
CDC55Q00362 YPR159C-AYPR159C-A 102 nt0.78□□□□□ -2.28
CDC55Q00362 YDL159W-AYDL159W-A 132 nt0.75□□□□□ -2.29
CDC55Q00362 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
CDC55Q00362 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
CDC55Q00362 YMR160WYMR160W 2451 nt0.73□□□□□ -2.29
CDC55Q00362 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
CDC55Q00362 UTP20YBL004W 7482 nt0.72□□□□□ -2.29
CDC55Q00362 YLR149C-AYLR149C-A 87 nt0.71□□□□□ -2.3
CDC55Q00362 YOR186C-AYOR186C-A 210 nt0.71□□□□□ -2.3
CDC55Q00362 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
CDC55Q00362 snR67snR67 82 nt0.68□□□□□ -2.3
CDC55Q00362 SKI7YOR076C 2244 nt0.68□□□□□ -2.3
CDC55Q00362 ESP1YGR098C 4893 nt0.62□□□□□ -2.31
CDC55Q00362 YGR122C-AYGR122C-A 129 nt0.62□□□□□ -2.31
CDC55Q00362 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
CDC55Q00362 tF(GAA)BtF(GAA)B 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)FtF(GAA)F 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)GtF(GAA)G 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)H1tF(GAA)H1 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)H2tF(GAA)H2 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)MtF(GAA)M 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)P1tF(GAA)P1 73 nt0.6□□□□□ -2.31
CDC55Q00362 tF(GAA)P2tF(GAA)P2 73 nt0.6□□□□□ -2.31
CDC55Q00362 SOV1YMR066W 2697 nt0.57□□□□□ -2.32
CDC55Q00362 MLP2YIL149C 5040 nt0.57□□□□□ -2.32
CDC55Q00362 YKL096C-BYKL096C-B 150 nt0.55□□□□□ -2.32
CDC55Q00362 YML100W-AYML100W-A 174 nt0.54□□□□□ -2.32
CDC55Q00362 FMP27YLR454W 7887 nt0.49□□□□□ -2.33
CDC55Q00362 YKL145W-AYKL145W-A 93 nt0.46□□□□□ -2.34
CDC55Q00362 YOL014WYOL014W 375 nt0.46□□□□□ -2.34
CDC55Q00362 YKL106C-AYKL106C-A 120 nt0.42□□□□□ -2.34
CDC55Q00362 THO2YNL139C 4794 nt0.41□□□□□ -2.34
CDC55Q00362 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
CDC55Q00362 tV(UAC)QtV(UAC)Q 76 nt0.35□□□□□ -2.35
CDC55Q00362 snR128snR128 126 nt0.35□□□□□ -2.35
CDC55Q00362 YOR376W-AYOR376W-A 156 nt0.33□□□□□ -2.36
CDC55Q00362 YDL114W-AYDL114W-A 114 nt0.32□□□□□ -2.36
CDC55Q00362 YER078W-AYER078W-A 165 nt0.31□□□□□ -2.36
CDC55Q00362 snR75snR75 89 nt0.29□□□□□ -2.36
CDC55Q00362 YOR316C-AYOR316C-A 210 nt0.23□□□□□ -2.37
CDC55Q00362 PAU9YBL108C-A 129 nt0.18□□□□□ -2.38
CDC55Q00362 snR77snR77 88 nt0.14□□□□□ -2.39
CDC55Q00362 SBH2YER019C-A 267 nt0.12□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms